Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5750 |
Symbol | |
ID | 5674076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6987284 |
End bp | 6988120 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641244603 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001510006 |
Protein GI | 158317498 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTGG TCACCGTCCG GGACGGAACC GAACTGTACT ACCGCGACTG GGGGCGGGGG CCGTTGGTGG TCCTGCTCGG GGCCGCTGTC ATGAACTCTC GGATGTGGGA GTCGTTGGCG TACCACCTGG CCGGCAACGG GTTCCGCTGC GTCGCCTACG ACCGCCGCGG CACCGGGCGG TCCGACTGGC CCTGGTCCGG CTACGACTAC GACACCCTCG CCGACGACCT CGCCCACCTG CTCGAGCACC TTGACGCGAG GGACGCCGCC CTCGTCGGCT ACGGGGTCGG CGGTGGGGAG GCGGTCCGCT ACCTGGCGCG CGACGGTGAC GCTCGGGTCT CGAGCCTTGT CCTCGCCAGC AGCACCACGC CGATCATCAT GAAGACCGCG GACAACCCCG ACGGGACGGA CGTCGCGGTC TTCGAGCAGA CCATCGCCGC CGCCGAGCAG GACCGGGCGC GATGGGTGGC CGAACTCGTC GCGCCCTTTT TCGGTGGGTC CGATGGGTCG CCGACGCGGC TCGGCCTGTC GTCGTACGGC GCCACGTTCT TCGAGTCGGT GGCGCTCGAC AGCTCGCTGA GGGCAACCGT GGAGATCTAC CGGACCCTGT TCATGGCCGA CCTGCGCGCC GACGTCGCCA GAGTCGTCGT TCCCACGCTG GTCGTGCACG GCGAGGCGGA CGTGGTCGCC CCGATCGACC TGTGCGGCAG GCGGACCGCC GCGCTGCTTC CGAACAGCAC CTTCGTCAGC TACGAAGGTG CAGCTCACGG GTTGTTCGCG ACGCACGCCG ACCGGCTCAA CCGGGACGTC GTCGCGTTCA TCGCCCATGG TCGGTAA
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Protein sequence | MPVVTVRDGT ELYYRDWGRG PLVVLLGAAV MNSRMWESLA YHLAGNGFRC VAYDRRGTGR SDWPWSGYDY DTLADDLAHL LEHLDARDAA LVGYGVGGGE AVRYLARDGD ARVSSLVLAS STTPIIMKTA DNPDGTDVAV FEQTIAAAEQ DRARWVAELV APFFGGSDGS PTRLGLSSYG ATFFESVALD SSLRATVEIY RTLFMADLRA DVARVVVPTL VVHGEADVVA PIDLCGRRTA ALLPNSTFVS YEGAAHGLFA THADRLNRDV VAFIAHGR
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