Gene Franean1_5750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5750 
Symbol 
ID5674076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6987284 
End bp6988120 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content70% 
IMG OID641244603 
Productalpha/beta hydrolase fold 
Protein accessionYP_001510006 
Protein GI158317498 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTGG TCACCGTCCG GGACGGAACC GAACTGTACT ACCGCGACTG GGGGCGGGGG 
CCGTTGGTGG TCCTGCTCGG GGCCGCTGTC ATGAACTCTC GGATGTGGGA GTCGTTGGCG
TACCACCTGG CCGGCAACGG GTTCCGCTGC GTCGCCTACG ACCGCCGCGG CACCGGGCGG
TCCGACTGGC CCTGGTCCGG CTACGACTAC GACACCCTCG CCGACGACCT CGCCCACCTG
CTCGAGCACC TTGACGCGAG GGACGCCGCC CTCGTCGGCT ACGGGGTCGG CGGTGGGGAG
GCGGTCCGCT ACCTGGCGCG CGACGGTGAC GCTCGGGTCT CGAGCCTTGT CCTCGCCAGC
AGCACCACGC CGATCATCAT GAAGACCGCG GACAACCCCG ACGGGACGGA CGTCGCGGTC
TTCGAGCAGA CCATCGCCGC CGCCGAGCAG GACCGGGCGC GATGGGTGGC CGAACTCGTC
GCGCCCTTTT TCGGTGGGTC CGATGGGTCG CCGACGCGGC TCGGCCTGTC GTCGTACGGC
GCCACGTTCT TCGAGTCGGT GGCGCTCGAC AGCTCGCTGA GGGCAACCGT GGAGATCTAC
CGGACCCTGT TCATGGCCGA CCTGCGCGCC GACGTCGCCA GAGTCGTCGT TCCCACGCTG
GTCGTGCACG GCGAGGCGGA CGTGGTCGCC CCGATCGACC TGTGCGGCAG GCGGACCGCC
GCGCTGCTTC CGAACAGCAC CTTCGTCAGC TACGAAGGTG CAGCTCACGG GTTGTTCGCG
ACGCACGCCG ACCGGCTCAA CCGGGACGTC GTCGCGTTCA TCGCCCATGG TCGGTAA
 
Protein sequence
MPVVTVRDGT ELYYRDWGRG PLVVLLGAAV MNSRMWESLA YHLAGNGFRC VAYDRRGTGR 
SDWPWSGYDY DTLADDLAHL LEHLDARDAA LVGYGVGGGE AVRYLARDGD ARVSSLVLAS
STTPIIMKTA DNPDGTDVAV FEQTIAAAEQ DRARWVAELV APFFGGSDGS PTRLGLSSYG
ATFFESVALD SSLRATVEIY RTLFMADLRA DVARVVVPTL VVHGEADVVA PIDLCGRRTA
ALLPNSTFVS YEGAAHGLFA THADRLNRDV VAFIAHGR