Gene Franean1_5737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5737 
Symbol 
ID5674063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6972149 
End bp6972541 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content66% 
IMG OID641244590 
ProductCopY family transcriptional regulator 
Protein accessionYP_001509993 
Protein GI158317485 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACAAC TCGGCGACCT GGAAGCCGAA ATCATGGACC GGGTGTGGTC CGCACGCGGC 
CCGGTGGCTG TCCGTGACGT CCGGGCACTA CTCGCGCCGA CACGCCCGTT GGCCTACACG
ACCGTGATGA CCGTCATGGA CCGGCTGTTC CACAAAGGGT GGCTGACCCG GGAACGAGCC
GGACGTTCCT ACCGCTACCA GCCCGCATTG AGCCGAAGCG CCTACACCGC CCAGCTGATG
AGATCCGTGC TTTCCGGGGC GGACGACCGA GGTCTGACGC TGCTCCACTT CGTGCACGCC
ATGGATGCTG CGGAGTACGA GACGTTGCGC GAAGCGGTGC AGTGGCACTC CGCCAGCCGC
GGTCGCGACG ATGAGGAACC CACCTCGCCA TGA
 
Protein sequence
MEQLGDLEAE IMDRVWSARG PVAVRDVRAL LAPTRPLAYT TVMTVMDRLF HKGWLTRERA 
GRSYRYQPAL SRSAYTAQLM RSVLSGADDR GLTLLHFVHA MDAAEYETLR EAVQWHSASR
GRDDEEPTSP