Gene Franean1_5732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5732 
Symbol 
ID5674058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6966607 
End bp6967446 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content66% 
IMG OID641244585 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001509988 
Protein GI158317480 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGGA CGATCCGAGC GGCGCTTGTC CAGGCGCGGT GGACGGGCGA CCGAGAAACG 
ATGATCAAGG CTCACGAGGA GCACGCGCGG TCGGCCGCCG CGCTGGGCGC ACAGGTCATC
TGCTTCCAGG AGCTCTTCTA CGGGCCTTAT TTCTGCCAGG TTCAGGACGC CGCCTTCTAC
TCCTACGCGG AGTCGGTGCC GGGGCCGATC GTCGACCGGT TCGCCGCGCT CGCCGCTGAG
CTCGGGATAG TGATGATTCT GCCGGTCTAC GAGCAGGAGC AACCCGGGAT CCTCTACAAC
ACGGCGGCGG TCGTGGACGC CGACGGCTCC TTTCTCGGCA AGTACCGCAA GACCCACATC
CCGCACGTGG CCGGATTCTG GGAGAAGTTC TACTTCCGGC CCGGGAACCT CGGATATCCG
GTCTTCGACA CGGCGGTCGG CCGGATCGGG GTCTACATCT GTTACGACCG TCATTTTCCG
GAGGGCTGGC GCGCGCTCGG CCTGAACGGG GCCGAGCTGG TGTTCAACCC GTCCGCCACC
TCCCGCGGCC TGTCGAACTA CCTGTGGAAG CTCGAGCAGC CCGCGGCCGC GGTCGCCAAC
GAGTACTACG TCGGCGCGGT GAACCGGGTG GGTGTCGAGG ACCTGGGCGA CGACGACTTC
TACGGAACCT CCTACTTCGT CGACCCCGAG GGGACGTTCG TCGACGGCAC CGCGGACGCG
CACGAACCGG AACTGCTGGT CCGAGACCTG GACATGAGCC TGTTGACCAC GGTGCGCAAC
CGGTGGGCGT TCTATCGTGA CCGACGGCCG GACACCTACG GCGACCTCAC CGCGCCGTGA
 
Protein sequence
MSRTIRAALV QARWTGDRET MIKAHEEHAR SAAALGAQVI CFQELFYGPY FCQVQDAAFY 
SYAESVPGPI VDRFAALAAE LGIVMILPVY EQEQPGILYN TAAVVDADGS FLGKYRKTHI
PHVAGFWEKF YFRPGNLGYP VFDTAVGRIG VYICYDRHFP EGWRALGLNG AELVFNPSAT
SRGLSNYLWK LEQPAAAVAN EYYVGAVNRV GVEDLGDDDF YGTSYFVDPE GTFVDGTADA
HEPELLVRDL DMSLLTTVRN RWAFYRDRRP DTYGDLTAP