| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5723 |
|---|
| Symbol | |
|---|
| ID | 5674049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 6947222 |
|---|
| End bp | 6948415 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641244576 |
|---|
| Product | glycerate kinase |
|---|
| Protein accession | YP_001509979 |
|---|
| Protein GI | 158317471 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1929] Glycerate kinase |
|---|
| TIGRFAM ID | [TIGR00045] glycerate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.669128 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCCT CACCTGACGC GGTGCCCATC CCACCCACCG CGCCATCCGG CAGCCCGCTG
CGGATCGTCA TCGCGCCCGA CTCATTCAAG GGCTCGCTCT CGGCCACGGA GGCGGCGACC
GCGCTGGCCC GAGGCTGGCG CACGGTACGC CCGGACGACG TTGTGCTCAC CGTTCCGATC
GCCGACGGCG GCGAGGGCAC GCTCGATGTC TTCAGCGCGG CCGTCCCGGA AGCCGTCAGG
AACACGCTGG ACGTCACCGG CCCCGACGGC CGACGGGTGA CAGCGGGGTG GCTCGCGCTG
CCCGGCGGGA CAGCCGTGGT CGAACTGGCC CAGGCGAGCG GCCTTCCCCT CATGGCGGAC
CTTGATCCGC TGAATGCCCA CACCGTCGGG CTCGGCGAGA CCATCGCCGC CGCCCTCGAC
GCGGGCAGCC GGCGCATCCT CGTCGCACTC GGCGGCTCCG CGTCCACGGA CGGCGGGACG
GGACTCTTGA CCGCGCTCGG CGCCCGCTTC CTCGACCCCG CCGGCCACCC GCTGCCCCCC
GGCGGCGGCA GCCTCCGCTC GCTGGCCACC GTGGATCTGA CCAGCCTGCG CGCCGCCCCT
CCCGACGGCG TGCACTGCCT GGTGGACGTC GACGCGCCCC TGCTGGGGTC GACGGGAGCC
GCCGCTGTGT TCGGACCGCA GAAAGGCGCC GGGGCAGCGG AGATCACCCT CCTCGACGCG
GGCCTGGCCC GGCTGGTCGA GTGCATGGAA CAGGCGGGCG CGGCCGCGGG CCTCGCCACA
CTGCCCGGCG CTGGGGCGGC GGGCGGCACC GCCTACGGGC TCGCGGCGGC CCTGGGCGCC
ACCCTGGTGC CCGGCGCGAC CACCATCGCC GAGCACGCCG GACTGCCGGC AGCCCTCGCC
GGCGCGGACC TGCTGATCAC CGGCGAGGGG CGCTTCGACC ACACGTCCCG GGCCGGGAAG
GTAGTCGGCG CGGTGTCGAC GCTGGCAGCC GGGGCCGGGC TGCCCCTGGT GGTGGTCGCC
GGCCAGATAG CCGCCCGCCC GCCGATGGGC GGGGACGCAG TCGCGCTCAC CGACCTCGCC
GGCGGGACGG CCGCGGCGAT GGCTCATCCC GTCCACTGGC TGACGCAGGC GGGCGCTCTC
CTCGCTCGAC GTAACTCGGA CGGCGTGACG AGAGCGGTAA TCCGGCAGCC GTAG
|
|---|
| Protein sequence | MIPSPDAVPI PPTAPSGSPL RIVIAPDSFK GSLSATEAAT ALARGWRTVR PDDVVLTVPI
ADGGEGTLDV FSAAVPEAVR NTLDVTGPDG RRVTAGWLAL PGGTAVVELA QASGLPLMAD
LDPLNAHTVG LGETIAAALD AGSRRILVAL GGSASTDGGT GLLTALGARF LDPAGHPLPP
GGGSLRSLAT VDLTSLRAAP PDGVHCLVDV DAPLLGSTGA AAVFGPQKGA GAAEITLLDA
GLARLVECME QAGAAAGLAT LPGAGAAGGT AYGLAAALGA TLVPGATTIA EHAGLPAALA
GADLLITGEG RFDHTSRAGK VVGAVSTLAA GAGLPLVVVA GQIAARPPMG GDAVALTDLA
GGTAAAMAHP VHWLTQAGAL LARRNSDGVT RAVIRQP
|
|---|
| |