Gene Franean1_5719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5719 
Symbol 
ID5674045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6941579 
End bp6942199 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content71% 
IMG OID641244572 
Producthypothetical protein 
Protein accessionYP_001509975 
Protein GI158317467 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.337015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCTCCG GGCGCGTCGT CCCCCCGCGT CACAACCCCG GCGGGACGCC GTCCGGCGGA 
AGATCGGCCG GCGGGACGTC GGTTGGCGGG ATGTCGGCCG GACGACAGGC GGCCGGCGTG
CTGGCGGTGG TCGCCCTGGC GGCCTCCGTG GCGGCGTGCG CCGGGCTCAC GGGTGCCGGG
AGCGTGCCGG TGCCCGAGCC CCCCGGGGCG GCTGCCCGGA ACGCGGCGGG CGCGGGAGCA
CCGGGGGCGG TCACCGAGAC CGTCACCGTG CGGGTTCGCG ACCGGACGGT CACGGCAGAA
GTCGCCGACA GTGACGACGA GCGGCGCCGT GGCCTGATGT ATCGAACCTG GCTTCCGCCC
GACCACGGCA TGATCTTTGA TTTTGGCGGT GAGACGACGT CCGGCTTCTA CATGTTCCGG
ACGTTGCTGC CTCTTTCGAT CATGTTTGTC CGAGACGGTA GGGTTGTCAG CGTGCGGGAG
ATGACGCCGT GTTCGGGCGA CGATCCGTCG GCCTGCCCGG TCTACTACCC GGACGGGGCA
TACACACACG CAGTGGAGGC ACCGGCACAC ACCTTCGCCG GAGTCGCCAC CAGTGATCCG
GTGGCGATCG GTTCGGACTG A
 
Protein sequence
MPSGRVVPPR HNPGGTPSGG RSAGGTSVGG MSAGRQAAGV LAVVALAASV AACAGLTGAG 
SVPVPEPPGA AARNAAGAGA PGAVTETVTV RVRDRTVTAE VADSDDERRR GLMYRTWLPP
DHGMIFDFGG ETTSGFYMFR TLLPLSIMFV RDGRVVSVRE MTPCSGDDPS ACPVYYPDGA
YTHAVEAPAH TFAGVATSDP VAIGSD