Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5719 |
Symbol | |
ID | 5674045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6941579 |
End bp | 6942199 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641244572 |
Product | hypothetical protein |
Protein accession | YP_001509975 |
Protein GI | 158317467 |
COG category | [S] Function unknown |
COG ID | [COG1430] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.337015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCTCCG GGCGCGTCGT CCCCCCGCGT CACAACCCCG GCGGGACGCC GTCCGGCGGA AGATCGGCCG GCGGGACGTC GGTTGGCGGG ATGTCGGCCG GACGACAGGC GGCCGGCGTG CTGGCGGTGG TCGCCCTGGC GGCCTCCGTG GCGGCGTGCG CCGGGCTCAC GGGTGCCGGG AGCGTGCCGG TGCCCGAGCC CCCCGGGGCG GCTGCCCGGA ACGCGGCGGG CGCGGGAGCA CCGGGGGCGG TCACCGAGAC CGTCACCGTG CGGGTTCGCG ACCGGACGGT CACGGCAGAA GTCGCCGACA GTGACGACGA GCGGCGCCGT GGCCTGATGT ATCGAACCTG GCTTCCGCCC GACCACGGCA TGATCTTTGA TTTTGGCGGT GAGACGACGT CCGGCTTCTA CATGTTCCGG ACGTTGCTGC CTCTTTCGAT CATGTTTGTC CGAGACGGTA GGGTTGTCAG CGTGCGGGAG ATGACGCCGT GTTCGGGCGA CGATCCGTCG GCCTGCCCGG TCTACTACCC GGACGGGGCA TACACACACG CAGTGGAGGC ACCGGCACAC ACCTTCGCCG GAGTCGCCAC CAGTGATCCG GTGGCGATCG GTTCGGACTG A
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Protein sequence | MPSGRVVPPR HNPGGTPSGG RSAGGTSVGG MSAGRQAAGV LAVVALAASV AACAGLTGAG SVPVPEPPGA AARNAAGAGA PGAVTETVTV RVRDRTVTAE VADSDDERRR GLMYRTWLPP DHGMIFDFGG ETTSGFYMFR TLLPLSIMFV RDGRVVSVRE MTPCSGDDPS ACPVYYPDGA YTHAVEAPAH TFAGVATSDP VAIGSD
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