| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5715 |
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| Symbol | |
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| ID | 5674041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6935924 |
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| End bp | 6937612 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244568 |
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| Product | amine oxidase |
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| Protein accession | YP_001509971 |
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| Protein GI | 158317463 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0865614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG GGGGGGACAC GCGGCCGGGT CACCGGCCGG GAGATCGGGC CGGGACCGGT
GCGGCGGCGC GGGGGCGGCG GGTGGTCGTC ATCGGCGGCG GCCTCGCCGG TATCGCCGCC
GCGCTGGTCG CGGCGGACGA GGGTGCCGAG GCGGTGCTGC TGGAGGCCCG GCCGCGTCTG
GGCGGGGCGA CGACCTCGTT CCAGCGCAAG TTCCAGGACG GCACGCTGTG GATCGACACC
GGTCAGCACG TGTTCATGCG GTGCTGCACC GCCTACCGCG GGCTGCTGGC CCGGCTGGGG
GTGACGCACC TCACCACGCT GCAGCCGCGG CTGGACGTCG AGGTGCTGAT CGCCGGCTCG
CTGACCCGGA CCAGGCTGCG CCGGACCAGG GTGCCGTTGC CGGCTCCGCT GCACCTCGCC
CCGGCCCTGC TGGGGTATCG GGCGATCCCG CCCGCCGACC GGATCCGCGC GGCGCTGGCG
GCCTTCCGTA TCGGCCGCCT CGATCAGCGC GACCCCTCGG TGGACGGCGA CTCCTTCGGC
GGCTGGCTCG GCCGGCACGG CCAGAGCGCC GCGGCCACCG AGGCCCTCTG GGAGCTGCTG
ACCGTCGCGA CCCTCAACGC GCCGGCGTCC GAGGCTTCAC TCGGCCTGGC CGCCAAGGTG
GTCCGCACCG GCCTGCTCGA CGGGGCCGAT GCGGGTGACC TGGGCTGGCC CGAGGCCCCG
TTGCAGCAAC TGCACGGCGA CGCGGCGGTG CGGGCACTGG AGGCGGTGGG CGGCACGGTC
CGCACGGCGA CCAAGGCCCG GGCCATCACC CGGTCGGCGG CCGGCTGGGA GGTCACCCTG
GACGGCGGCG AGGTCCTGGT CGCGGACGGG GTGGTGCTGG CGGTTCCGCC GCCGGCCGCC
GCCGGCCTGC TGCCCGAGGG CTCCGGCGTC GACCCGGCGA AGCTGCGCGA GCTCGGCGTC
TCGCCCATCA TCAACGTGCA CATGATCTTC GATCGGCCGG TGCTCGACGG TCCGATGCTC
GCGGTCGTCG GCTCGCCCAT TCAGTGGATC TTCGACCGGA CGGTCTCCTC CGGCCTGGCC
GAGGTGGGCC CGCCCGGGGC GCAGTACCTC GCGCTGTCGC AGTCGGCGGC GGAGGAATGG
GTCGACCAGC CCGCGAACGA CCTGCGAAAG CTGTTCGTCG AGGAGATGCG CCGGTTGTTC
CCGGCCGCCC GGGCCGCCGA GCTGCTCGAG GTGTTCGTGA CCAGGGAGCG CACCGCGACC
TTCCGGCAGG CGCCCGGTTC GCTCGGGTTG CGCCCGGATC AGGCGACCAG CCTGCCCGGG
TTCGCGCTGG CCGGCACGTG GACGGACACC GGGTGGCCGG CGACCATGGA AGGTGCTGTG
CGTAGCGGGA TCGCCGCGGC CCGTGAGACG CTCGCCGGCA TGGGGGTAGT CGGAAGCGCA
CTGTCTGTGG TCGGTCACGG TCCGCCTGGG CAACGCGGCG AGTCGCGCGG CGAGGCACCG
ACCCGTTCTG GGGACATCGA AGGTCTCACC CCGGCCTCCG CCGTCGCGAC GGAGGCAGGC
ACCGTGGACG TGCGGACGGT CAGCGCCGCG GCGACAGCGG CTGAACCGGC GGCGCCACAC
ACAGCGACGC CACACACAGC GACGGCCCAG ACAGAGACGT CTAAGTCCAC GGGGGGATTC
CCGGTATGA
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| Protein sequence | MSAGGDTRPG HRPGDRAGTG AAARGRRVVV IGGGLAGIAA ALVAADEGAE AVLLEARPRL
GGATTSFQRK FQDGTLWIDT GQHVFMRCCT AYRGLLARLG VTHLTTLQPR LDVEVLIAGS
LTRTRLRRTR VPLPAPLHLA PALLGYRAIP PADRIRAALA AFRIGRLDQR DPSVDGDSFG
GWLGRHGQSA AATEALWELL TVATLNAPAS EASLGLAAKV VRTGLLDGAD AGDLGWPEAP
LQQLHGDAAV RALEAVGGTV RTATKARAIT RSAAGWEVTL DGGEVLVADG VVLAVPPPAA
AGLLPEGSGV DPAKLRELGV SPIINVHMIF DRPVLDGPML AVVGSPIQWI FDRTVSSGLA
EVGPPGAQYL ALSQSAAEEW VDQPANDLRK LFVEEMRRLF PAARAAELLE VFVTRERTAT
FRQAPGSLGL RPDQATSLPG FALAGTWTDT GWPATMEGAV RSGIAAARET LAGMGVVGSA
LSVVGHGPPG QRGESRGEAP TRSGDIEGLT PASAVATEAG TVDVRTVSAA ATAAEPAAPH
TATPHTATAQ TETSKSTGGF PV
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