| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5709 |
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| Symbol | |
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| ID | 5674035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6926442 |
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| End bp | 6928178 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244562 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001509965 |
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| Protein GI | 158317457 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.494905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGC CCCCCGGCTT GCCGCCGGGC GGCCAACCGC ACGCCGTGAC CCGCGCACCG
GGATCGGACC ATGACTCAGC CGAGGAGCGG CGCCAGCGCC GGGCCAGCCC GGCAGGCCTG
ACCCACCGCG AGACCATGCG GGCCCTCTCC GGCCTGCTGC TGGCCCTGTT CGTATCGATG
ATCTCCTCCA CCATCGTGAC GAACGCGCTG CCCAGGATCG TCTCCGACCT GCACGGCAGC
TCGACCAGCT ACACCTGGAT GATCACGGCG ACGCTGCTGG CGATGACCGC CACCACGCCG
ATCTGGGGCA AGCTGGCGGA CCTGTTCAAC CGTAAGGTGC TGGTCCAGAC GGCCCTCGGG
ATCTTCGTGG GCGGATCCCT CCTGGCCGGG CTGTCGACGT CCACGAGCAT GCTCATCGCG
TTCCGCGTGG TGCAGGGCGT CGGCGTCGGC GGGCTGTCGG CGCTGGTCCA GATCGCGATA
GCCGCGATGA TCGCGCCGCG TGAACGCGGG CGCTACAACG GCTACCTGGG CGCGACCTTC
GCCGTGTCGA CCGTCAGCGG CCCGCTCATC GGCGGCGTGA TCGTCGACAT CCCGGGCCTG
GGCTGGCGCG GCTGCTTCTA CCTGAGCCTG CCGATTGCCA TTGTCGCGTT CGTCATTCTC
CAGCGGACGC TGCAGCTGCC CACGGTGCGC CGCGAGATTT CCATCGACTA CGCGGGCGCG
ACCCTGATCG CCGCCGGCGT GAGCGCCCTG CTGATCTGGA CGTCGCTGGC GGGGTCGAGC
TTCCCGTGGG CGTCCGCGCA GACAGCACTG CTGCTCGGCG GGGGGCTGAC GCTACTCGCC
GTGGCCGTCT GGGTCGAGGC GCGCGCCACC GAGCCGATCG TCCCGCTGCG GCTGTTCCGT
AACCGGACGA TCGTGCTGGC CGTGGCCGCG AGCGCCTGCC TCGGCACCGT CATGTACAGC
GCGAATCTGT TGTTCAGCCA GTACTTCCAG CTCGGCCGCG GGGAGAGCCC GGTGCTGTCG
GGGCTGCTCA CGGTGCCGAT GGTGGGCGGC CTGGCCGTCT CGTCTCTGGT GGTGGGAGGT
GCCATCAGCC GCACCGGCTA CTGGAAGCGC TACCTGATCG CCGGCACGAT CCTGATCGGG
ACGGGCCTCG TCCTGCTGAG CACAATCAGC GAGCACACGA ACCTCGTCGC GGTGTCGGTG
TTCGCGAGCC TGGTGGGAGC CGGACTGGGC ATGACCCAGC AGAACCTGGT GCTCGCCGCG
CAGAACTCCG CCGACGCCGC CGATCTCGGG GTGACCAGCT CCACCGTGGC GTTCTTCCGC
AGCGTCGGCG GGACGAGCGG CGTCGCGGCA CTCGGCGCGC TACTCGCCCA TCGCGTCAGC
GTGTCGTCCG TCTCCGGACT GCGCTCGCAC GGCCTGCCAG CCGACACTCT TGGGGACGGC
CGCTCCGTGC CCGATCCCAC AGCGCTGCCC GGCCCGGTCG CCGACGTCGT GCACCACGCG
TACGGGCTCG GAGTGTCCGA CGTGTTCCTC GCCAGCGCGC CACTCGCGCT GCTCGCGCTG
GTAGCGGTGC TGTTCGTGCC GGCCACACGG CTGCGTTCCA GCGCGGGGGT TGCGGGCGGC
GAGCGTGTAA CGCCCGAGCG CGCCCACCCC GGAGGGGCCG TGACGGACCT CGACGAGGAT
GTGGAACGGA CCGCGTGGCG GGCAGCCGCC GGTGTCTCGG CCGAACCTGC ACCATAA
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| Protein sequence | MTPPPGLPPG GQPHAVTRAP GSDHDSAEER RQRRASPAGL THRETMRALS GLLLALFVSM
ISSTIVTNAL PRIVSDLHGS STSYTWMITA TLLAMTATTP IWGKLADLFN RKVLVQTALG
IFVGGSLLAG LSTSTSMLIA FRVVQGVGVG GLSALVQIAI AAMIAPRERG RYNGYLGATF
AVSTVSGPLI GGVIVDIPGL GWRGCFYLSL PIAIVAFVIL QRTLQLPTVR REISIDYAGA
TLIAAGVSAL LIWTSLAGSS FPWASAQTAL LLGGGLTLLA VAVWVEARAT EPIVPLRLFR
NRTIVLAVAA SACLGTVMYS ANLLFSQYFQ LGRGESPVLS GLLTVPMVGG LAVSSLVVGG
AISRTGYWKR YLIAGTILIG TGLVLLSTIS EHTNLVAVSV FASLVGAGLG MTQQNLVLAA
QNSADAADLG VTSSTVAFFR SVGGTSGVAA LGALLAHRVS VSSVSGLRSH GLPADTLGDG
RSVPDPTALP GPVADVVHHA YGLGVSDVFL ASAPLALLAL VAVLFVPATR LRSSAGVAGG
ERVTPERAHP GGAVTDLDED VERTAWRAAA GVSAEPAP
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