Gene Franean1_5694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5694 
Symbol 
ID5674020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6912746 
End bp6913108 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content76% 
IMG OID641244547 
Producturease, beta subunit 
Protein accessionYP_001509950 
Protein GI158317442 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0832] Urea amidohydrolase (urease) beta subunit 
TIGRFAM ID[TIGR00192] urease, beta subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCCCG GCGATCCCTT GATCCCCGGC GAGATCGTCA CCGCGCCCGG CACGGTGCGG 
CTGAACCCGG GCCGGCCGAC CCGGGTGCTG GTCGTGCGCA ACACGGGCGA CCGGCCCGTC
CAGGTCGGGT CGCACTACCA CTTCGCCGCC GCGAACCCGG CTCTCGACTT CGACCGCGAG
GCCGCCTGGG GCTACCGGCT GGCCGTCGCG GCGGGCACCG CCGTCCGGTT CGAGCCCGGG
GTCGAGCGCG AGGTCGAGCT GGTCGCCCTG GCAGGCGCCC GGGTCGTCCC GGGGCTGCGC
CCGGAGTGGG CCGGCCCGCT CGACGGTGGC CGCGGTGACC GTAAGGGGAG CGGCAGTGAG
TGA
 
Protein sequence
MIPGDPLIPG EIVTAPGTVR LNPGRPTRVL VVRNTGDRPV QVGSHYHFAA ANPALDFDRE 
AAWGYRLAVA AGTAVRFEPG VEREVELVAL AGARVVPGLR PEWAGPLDGG RGDRKGSGSE