Gene Franean1_5684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5684 
Symbol 
ID5674010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6901268 
End bp6902167 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content79% 
IMG OID641244537 
Productmolybdopterin dehydrogenase FAD-binding 
Protein accessionYP_001509940 
Protein GI158317432 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0308299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC CCGGCGGTCC GTCCACCGCT CTGCACCGGC CCGGGACGGT CGGCGAGGCC 
GTCGCAGCCC TCGCCGCCGA GGCACGGGCG GGCCGGCCGG TCGAGCTGCT GGCCGGCGGT
ACCGATCTGG TGCCCGCGCT GCGCACCGGG ACGCGCCGGC CGGCGGCGAT CGTCGCGCTG
CGCCGGGTGC TGGAGCTGCG GGTGCGCGGG GCAGGCGCGG ACACCCTCAC GATCGGCGCC
GGGGTCACCT ACACCGAGCT GGCCGGATGG TCACTCTCGC CCGGCCTGGC GGCGACGTCC
CGGGTGGTCG GGTCCGTCCA GATCCGCAAC TGCGGGACGG TCGGCGGGGC GCTCGGCTCC
GCCAACCCGC GCGGCGACCT CCTCACGTTC CTCACCGCGG CCCAGGCCGA GGTGCTGCTC
GCCTCCGAGG ACGGGTCGCG CGCCGCGGGC CTGGACGACT TCCTGAGCGC CGGCCGCCTG
CCGGGCGAGC TGGTGACGGC TGTCCGGGTG CCCCGCCCGA GCGGCCCGCA GACCTACCTC
AAGATCGGTG GCCGGCAGGC CGCGTTCCCG TCGCTGGTGT CCTGCGCGTT GCTCGTCGAC
CGGGTCCGCG AGCGGGTCTG CTGCGCCGTG GGCGGCGTGG CTGCCCGGCC GTGGCGGGTG
GCCGAGGCCG AGCGGCTGGC CGCCGCCGAC GTCGACTGGT CCACTGGGAC GGCCCCGGCC
GCCCTGGCAC GGCGCTTCGG TGAGCTGGCC GCGGCCGGTG TCCGCGCGGC GCCGCCGCTG
GGAGAGGACC CGCGCCATCC CCTGGAGTAC CGGGTGCACG CGGCCGGCGT GCTGGCCGCC
CGGGCCTTCG CCCGATGCCT CACGGCCCGG TCGGCGCCGC GGCGCGAGAG TGCCCCGTGA
 
Protein sequence
MTTPGGPSTA LHRPGTVGEA VAALAAEARA GRPVELLAGG TDLVPALRTG TRRPAAIVAL 
RRVLELRVRG AGADTLTIGA GVTYTELAGW SLSPGLAATS RVVGSVQIRN CGTVGGALGS
ANPRGDLLTF LTAAQAEVLL ASEDGSRAAG LDDFLSAGRL PGELVTAVRV PRPSGPQTYL
KIGGRQAAFP SLVSCALLVD RVRERVCCAV GGVAARPWRV AEAERLAAAD VDWSTGTAPA
ALARRFGELA AAGVRAAPPL GEDPRHPLEY RVHAAGVLAA RAFARCLTAR SAPRRESAP