Gene Franean1_5683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5683 
Symbol 
ID5674009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6900747 
End bp6901259 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content77% 
IMG OID641244536 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001509939 
Protein GI158317431 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0218674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGGTC ACCTGGGCGG GGAGCGCCGG CTTTCCTACC ACCTGAGCAT CGACGGCTCC 
CGGCGCGCCG TTACCGGGGC GCGGCTCGAG GAGTCGCTGC TGACGGTCCT GCGGGAGCGG
CTCGACGTCA CCTCCGTGAA GGACGCCTGC GAGCAGGGCC GGTGCGGGGC CTGCTCGGTG
CTGCTGGACG GCCGGCTGGT CACGGCCTGC ACCGTCCTCG CCGCCGACGC CGCCGACGCC
CGCGTGGTCA CCGTGGCCGG GCTGGGCCCG GGTGGGCCGG CCGCCGCGGT GCGCGCCGCC
TTCGTCGCGC ACGGGGCGGT CCAGTGCGGC TTCTGCACCC CGGGCCTGGT CGTGGCGGTC
ACCGACCTGC TCGCCCGCCG ACCGGGCGCC GACGAGGATG AGATTCAGGA GACACTGGCG
GGCAACATCT GCCGGTGCAC CGGGTACGGC CGCATCCTCG CGGCGGTCCG CGCCGTCCAG
GCGGGGCGGG GCGGCCCGCC CGGGTGGGCA TGA
 
Protein sequence
MPGHLGGERR LSYHLSIDGS RRAVTGARLE ESLLTVLRER LDVTSVKDAC EQGRCGACSV 
LLDGRLVTAC TVLAADAADA RVVTVAGLGP GGPAAAVRAA FVAHGAVQCG FCTPGLVVAV
TDLLARRPGA DEDEIQETLA GNICRCTGYG RILAAVRAVQ AGRGGPPGWA