| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5671 |
|---|
| Symbol | |
|---|
| ID | 5673998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6884321 |
|---|
| End bp | 6885430 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641244525 |
|---|
| Product | putative agmatinase |
|---|
| Protein accession | YP_001509928 |
|---|
| Protein GI | 158317420 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | [TIGR01227] formimidoylglutamase
[TIGR01230] agmatinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCATGG CACAGGCCGG CGATCGGGAC GTGGCACGCG AGCGGGGGAG CGCCGGTCCG
GTGCCGCCGT ACGCGGCGCG GGCCGCGGGA GCGGACGATC CCGGCGCGGA CGCCCCGGGA
TACTCCGGCC TGGCGACCTT CGCCGGTCTG CCCTGGATGC CGGGACTCGG CGATCTTCGG
GCGCGCCGGC CCGATGTCGC TGTGGTCGGG GCTCCGTTCG ACATCGCGAC CACGCACCGG
CCGGGCGCGC GTTTCGGCCC GCGGGCGCTG CGCGCTCAGG CGTACAACCC TGGCACATAT
CATCTTGATC TTGGTATAGA GATCTTTGAC TGGCTGGACG TCGTTGACGC GGGGGACGCG
CACTGCCCGC ACGGGCTGAC CGAGGTCTCA CATCGCAACA TCCGGGCGAA GGTCGGCGAC
GTCGCGCGGC TCGGCGTCAT CCCAGTGATC ATCGGGGGGG ACCACTCGAT CACCTGGCCG
GCGGCTAGCG GGGTCGCCGA GGCGGTGGGC TGGGGTGAGG TCGGCCTGCT GCACTTCGAC
GCCCACGCCG ACACGGCCGA CATCATCGAC GGGAACCTGG CCTCGCACGG GACGCCTATG
CGGCGGCTCA TCGAGTCGGG GGCGGTGCGC GGGCGCAACT TCGTCCAGGT GGGGCTGCGC
GGGTACTGGC CTCCGCCGGA CGTGTTCGCG TGGATGCGCG AGCAGGGTAT GCGCTGGCAC
CTGATGCACG AGATCTGGGA GCGGGGGAGC CGAGAGGTGG TCGCCGAGGC GATCGCGCAG
GCGGTGGACG GCTGCCGCGC GCTCTACCTG TCGGTCGACA TCGACGTCCT CGACCCGGGG
TTCGCGCCTG GGACGGGCAC CCCCGAGCCG GGCGGCATGA ACCCGGCCGA CCTGTTGCGG
GCCGTGCGGC AGATCGCGCT GGACACGCCG ATCGTCGCCG CGGACATCGT CGAGGTCTCG
CCTCCGTACG ACCACGCGGA GACGACGGTG AACAGCGCGC ACCGGGTCGC GATGGAGATT
TTCGCGGCGT TGGCGCATCG CCGCCGTAGC GCGGCCGGTG GGACGGCGGA CCTTCCCGCG
GGGCTCCCGA AGGCGAAAGC TGGGTCTTGA
|
|---|
| Protein sequence | MCMAQAGDRD VARERGSAGP VPPYAARAAG ADDPGADAPG YSGLATFAGL PWMPGLGDLR
ARRPDVAVVG APFDIATTHR PGARFGPRAL RAQAYNPGTY HLDLGIEIFD WLDVVDAGDA
HCPHGLTEVS HRNIRAKVGD VARLGVIPVI IGGDHSITWP AASGVAEAVG WGEVGLLHFD
AHADTADIID GNLASHGTPM RRLIESGAVR GRNFVQVGLR GYWPPPDVFA WMREQGMRWH
LMHEIWERGS REVVAEAIAQ AVDGCRALYL SVDIDVLDPG FAPGTGTPEP GGMNPADLLR
AVRQIALDTP IVAADIVEVS PPYDHAETTV NSAHRVAMEI FAALAHRRRS AAGGTADLPA
GLPKAKAGS
|
|---|
| |