Gene Franean1_5653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5653 
Symbol 
ID5673980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6865823 
End bp6866251 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content69% 
IMG OID641244507 
ProductthiamineS protein 
Protein accessionYP_001509910 
Protein GI158317402 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1977] Molybdopterin converting factor, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.764177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCC AGGTCCGTGT GCCGACGATC CTGCGCAGCT ACACGGGAGG CGCCAAGCTG 
GTCGAGGGCA CGGGCGACAC GCTCGCGGCG CTCTTCCACG ACCTCGACTC CCGGCACCCC
GGGCTGCGCG GGCGGCTGAT CTCCGGCGAG GGTGACGGCG AGCTCCACCG CTTCGTCAAC
ATCTACGTCA ACGACGAGGA CGTCCGCTTC CTGGGCAGCC TCGACGCCAA GCTCAGCGAC
GGCGACAATG TGACTATTCT CCCCGCCGTC GCCGGTGGCT CCGCCACCGT ACCGGCGACT
TTGGGTGAGG TGACTATTCT CCCCGCCGTC GCCGGTGGCT CCGCCACCGT TGACTTTGCT
GCCGACGACC TAGCCGGCGG CTGCGCTCGG GTGCCGATCT CGTCCGGCAT GGCTACCCGG
CTCTTCTGA
 
Protein sequence
MAVQVRVPTI LRSYTGGAKL VEGTGDTLAA LFHDLDSRHP GLRGRLISGE GDGELHRFVN 
IYVNDEDVRF LGSLDAKLSD GDNVTILPAV AGGSATVPAT LGEVTILPAV AGGSATVDFA
ADDLAGGCAR VPISSGMATR LF