Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5653 |
Symbol | |
ID | 5673980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6865823 |
End bp | 6866251 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641244507 |
Product | thiamineS protein |
Protein accession | YP_001509910 |
Protein GI | 158317402 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1977] Molybdopterin converting factor, small subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.764177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTCC AGGTCCGTGT GCCGACGATC CTGCGCAGCT ACACGGGAGG CGCCAAGCTG GTCGAGGGCA CGGGCGACAC GCTCGCGGCG CTCTTCCACG ACCTCGACTC CCGGCACCCC GGGCTGCGCG GGCGGCTGAT CTCCGGCGAG GGTGACGGCG AGCTCCACCG CTTCGTCAAC ATCTACGTCA ACGACGAGGA CGTCCGCTTC CTGGGCAGCC TCGACGCCAA GCTCAGCGAC GGCGACAATG TGACTATTCT CCCCGCCGTC GCCGGTGGCT CCGCCACCGT ACCGGCGACT TTGGGTGAGG TGACTATTCT CCCCGCCGTC GCCGGTGGCT CCGCCACCGT TGACTTTGCT GCCGACGACC TAGCCGGCGG CTGCGCTCGG GTGCCGATCT CGTCCGGCAT GGCTACCCGG CTCTTCTGA
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Protein sequence | MAVQVRVPTI LRSYTGGAKL VEGTGDTLAA LFHDLDSRHP GLRGRLISGE GDGELHRFVN IYVNDEDVRF LGSLDAKLSD GDNVTILPAV AGGSATVPAT LGEVTILPAV AGGSATVDFA ADDLAGGCAR VPISSGMATR LF
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