Gene Franean1_5649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5649 
Symbol 
ID5673976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6862509 
End bp6863255 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content71% 
IMG OID641244503 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001509906 
Protein GI158317398 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.704721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.90669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA CGATCCTGGG CTGTTCCGGC ACCTACCCGG GCCCCGCTTC GGCCTGCTCC 
TCCTACCTGA TCGAGGACGA GGGCTTCCGG CTCGTCCTGG ACGCCGGCAA CGGCTCCATG
GGTGAGCTGC AACGGCACTG CGACATCCGG GACGTCGACG CGGTGCTGCT GAGCCACCTG
CACGGCGACC ACTGCCTCGA CCTGGTCGCG ACGTCCTACG CCCGGCGCTA CCACCCGGAG
GGGATGCCGC CCAAGCTCCC GGTGTACGGG CCGATCAACA CCCAGGAGCG GCTGTGCGGC
GCGTTCGAGC GCTGGCCGGA CGACTCCCTG GCCGACATCT ACGACTTCCG CACGATCGGT
CCCGGCCGCC TGCACGTCGG GCCGTTCGCC ATCGACCTGG CCCGGGTCGC GCACCCGATC
GAGGCCTACG GGGTGCGGGT GACGGCCGGC GGGAAGACGC TCACCTACTC CGGCGACACC
GGGGTGTGCG ACCGGCTCGT CCGGCTGGCC CACGACAGCG ACCTGTTCCT GTGCGAGGCG
TCGTTCCTCG ACGGCGAGGA CAACCCGCCC GACCTGCACC TGACCGGCAA GGACGCCGGT
GAGCACGCGA CCCGCGCCGG TGTCGGGCGG CTGGTGCTGA CCCACCTCGT GCCCTGGGGC
AACGTGGAAC GCACCCACGG CGAGGCCGCG GGCGCGTTCG ACGGCGATCT GACACTCGCG
AGCACCGGCA CCTCCTACGA GATCTGA
 
Protein sequence
MKLTILGCSG TYPGPASACS SYLIEDEGFR LVLDAGNGSM GELQRHCDIR DVDAVLLSHL 
HGDHCLDLVA TSYARRYHPE GMPPKLPVYG PINTQERLCG AFERWPDDSL ADIYDFRTIG
PGRLHVGPFA IDLARVAHPI EAYGVRVTAG GKTLTYSGDT GVCDRLVRLA HDSDLFLCEA
SFLDGEDNPP DLHLTGKDAG EHATRAGVGR LVLTHLVPWG NVERTHGEAA GAFDGDLTLA
STGTSYEI