Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5649 |
Symbol | |
ID | 5673976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6862509 |
End bp | 6863255 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641244503 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001509906 |
Protein GI | 158317398 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.704721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.90669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGA CGATCCTGGG CTGTTCCGGC ACCTACCCGG GCCCCGCTTC GGCCTGCTCC TCCTACCTGA TCGAGGACGA GGGCTTCCGG CTCGTCCTGG ACGCCGGCAA CGGCTCCATG GGTGAGCTGC AACGGCACTG CGACATCCGG GACGTCGACG CGGTGCTGCT GAGCCACCTG CACGGCGACC ACTGCCTCGA CCTGGTCGCG ACGTCCTACG CCCGGCGCTA CCACCCGGAG GGGATGCCGC CCAAGCTCCC GGTGTACGGG CCGATCAACA CCCAGGAGCG GCTGTGCGGC GCGTTCGAGC GCTGGCCGGA CGACTCCCTG GCCGACATCT ACGACTTCCG CACGATCGGT CCCGGCCGCC TGCACGTCGG GCCGTTCGCC ATCGACCTGG CCCGGGTCGC GCACCCGATC GAGGCCTACG GGGTGCGGGT GACGGCCGGC GGGAAGACGC TCACCTACTC CGGCGACACC GGGGTGTGCG ACCGGCTCGT CCGGCTGGCC CACGACAGCG ACCTGTTCCT GTGCGAGGCG TCGTTCCTCG ACGGCGAGGA CAACCCGCCC GACCTGCACC TGACCGGCAA GGACGCCGGT GAGCACGCGA CCCGCGCCGG TGTCGGGCGG CTGGTGCTGA CCCACCTCGT GCCCTGGGGC AACGTGGAAC GCACCCACGG CGAGGCCGCG GGCGCGTTCG ACGGCGATCT GACACTCGCG AGCACCGGCA CCTCCTACGA GATCTGA
|
Protein sequence | MKLTILGCSG TYPGPASACS SYLIEDEGFR LVLDAGNGSM GELQRHCDIR DVDAVLLSHL HGDHCLDLVA TSYARRYHPE GMPPKLPVYG PINTQERLCG AFERWPDDSL ADIYDFRTIG PGRLHVGPFA IDLARVAHPI EAYGVRVTAG GKTLTYSGDT GVCDRLVRLA HDSDLFLCEA SFLDGEDNPP DLHLTGKDAG EHATRAGVGR LVLTHLVPWG NVERTHGEAA GAFDGDLTLA STGTSYEI
|
| |