Gene Franean1_5640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5640 
Symbol 
ID5673967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6853938 
End bp6854471 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID641244494 
Producthypothetical protein 
Protein accessionYP_001509897 
Protein GI158317389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.771523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATGG CGCACGCGAT TTCTGGTGCG ACAGTCGCAC TGGTCCTGGG TCTGCTGCTC 
GTGGCGGTTC CGGCGCGAGC CGGAGGGCCA ACGGTAACTC CGGCTACACC GGTGTCTCCG
GTCACGCCGG TCCTGACGGG CATCAGCGCG GCACACGCGG CCAGCGCCCG CGCGGACCTC
GTCCGGTTCC ACTTCCAGCT GGCCGCCCCC GCCGAGGTCA CCGTCCAGTA CGTGCCGGCC
TCGGAACTGA TACAGGACGG CTCCGGCCTT CCCGTCGCCG TGCGGGGCCG GTCCTTCGTC
AAGGTGGTCT TCCGTAATGC GGCGGCTCAT GACGAGGAGG GCAGGGCTAC GGCTCCGCGC
AACCTGTTCC CGGTCCGCGC GACCACCAAT GTTGTCCAGG TGCGGTCGGG TGGCGACTTC
GAGGGCGTGG TCACATACTT CATCGGCCTG CGCCAGCCCG CGCCCGGACC GCAGGTACAG
CCGACGGCGC AGCACACCGG CACCAGCGTG ATCGTGGCGA TCCCGACCCG ATAA
 
Protein sequence
MRMAHAISGA TVALVLGLLL VAVPARAGGP TVTPATPVSP VTPVLTGISA AHAASARADL 
VRFHFQLAAP AEVTVQYVPA SELIQDGSGL PVAVRGRSFV KVVFRNAAAH DEEGRATAPR
NLFPVRATTN VVQVRSGGDF EGVVTYFIGL RQPAPGPQVQ PTAQHTGTSV IVAIPTR