Gene Franean1_5617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5617 
Symbol 
ID5673944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6828844 
End bp6829506 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content73% 
IMG OID641244470 
Producthypothetical protein 
Protein accessionYP_001509874 
Protein GI158317366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000997353 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.347702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCG GATTCGCGAT CTTCCTCATC GCCGCGGGCG CAACGCTCCG CTATGCGTTG 
TCCTATCGGT TGACCGGCAT CGACCTGCGG GTCCTCGGTT CGATCATCAT GCTGGCCGGT
GGAGCCACCC TGCTCGTCTG TCTCGGGCGC GGTCTACGCC CGCCGCGCCG CCGCCGACCG
GCAGCCGTTG CCGCGACACT TCCACTTCCT CCGTTTCCCC CGCGTTCCCC CTCGGCGGAT
GGCACGACCG AGCGGTTCTG GCCGCAGGCC GGCACTGAAC GGTTCGGGAC AGAGGAGCCA
ACCGGATTTC GTTTCCCGGC CGCCGGACCA CCCCCGGGCC AACATCCCCA CGCGGGCATC
CCCGCCATGT GGGAGGACCT CGGCCCCAGC GGTTTCCCCG GCCCCGCCGG GCAGGTCTAC
AACCCCGGGT ACCCCCACGA AGGTGGTCCC GAGTGGTGGG GCGCCGGAGA GAGTCCGCCC
CGCTCAGACG TCGCACCGGG GTGGTGCGGC ACCGGCCCGG ACCTGGCCCC GCCGCAAGGC
TGCGAGCCCG CCGCGGGCAC CTCCGAGGAG CCCGGCGAGC ACGCCCGTCA CCTGCCACCG
AGGGCCGTGT GGCACCTCGA CGACGCGGGA TGGCCCGACG AGACACACCG CCCGGCGGGC
TGA
 
Protein sequence
MTTGFAIFLI AAGATLRYAL SYRLTGIDLR VLGSIIMLAG GATLLVCLGR GLRPPRRRRP 
AAVAATLPLP PFPPRSPSAD GTTERFWPQA GTERFGTEEP TGFRFPAAGP PPGQHPHAGI
PAMWEDLGPS GFPGPAGQVY NPGYPHEGGP EWWGAGESPP RSDVAPGWCG TGPDLAPPQG
CEPAAGTSEE PGEHARHLPP RAVWHLDDAG WPDETHRPAG