| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5611 |
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| Symbol | |
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| ID | 5673938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6808950 |
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| End bp | 6810140 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244464 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001509868 |
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| Protein GI | 158317360 |
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| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
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| TIGRFAM ID | [TIGR01426] glycosyltransferase, MGT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.126524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000566285 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCCGTG TTCTCTTCGC CGTGCCGCCG CTGACCGGGC ACGTGAACCC GGCGGTGGGC
ATCGCCGGCG AGCTGGCGGC CCGCGGGCAG GAGGTGGCCC TGGTCGGCCA CGCGAGCGTC
GTCGGGCCGC TCGTCCCGCC GTCCGTCCCG CTCATCGCGC TGCCAGGGGA GATATCGGCC
GACCAGCGGG CCGAGCTGGA GGCACGGTCC CGGCCGCTGC GCGGGCCCGC GTCACTGAAG
TTCCTGTGGG ACGAGTTCCT GCTGCCGCTG GGCGCCTCGA TGGCGCGGGA CGTCGGTGCC
GTCGTCGAAC GGTGGCGCCC GGATGTGATC GTCGCCGACC AGCAGGCGGT CGGGGTCGCC
ATGGTCGCCC GTCGGCGCGG CATCCGGTGG GCCACGCTCG CCACCACGTC GGCGGAGCTC
GACGACCCCT ACGCCGTGCT CGCCGGGGTC GGGAACTGGG TGTCGGAGCG GCTGCGGGAC
TTCCAGGTCG CGAACGGCGT CCCGGCGGAG GAGGCGGCGC GCGGTGACCT GCGCTTCTCT
GAGGACCTCA CTGTGGTCTG CTCGGTGCCC TCGTTGCTGC GTACTGCCAG TCATCCGTCC
CATCACGTGT TCGTCGGCTG CGCCGCCGGA CTGCGCCGGT CGGCCCCGGA GTTCCCCTGG
GAGTGGCTCG ACCGGGACCG CCGCACCGTG CTCGTCTCGC TCGGCACGGT GACCCGGGAG
GCCGGCGGGC GTTTCCTGCG CGCGGCCGCG GAGGCGCTGG TGGGGATGTC CGACCGGGTG
CAGGCCGTGA TCGTCGCGCC TCCCGGCCCG CTGGACGACC TCGCCGGCCA GGTTCCCGAC
GACCTGCTGG TCCGTCCGTT CGTGCCGCAG GTGGACCTGA TGGCCGGACT GGACGCGATA
GTGTGCCACG CGGGCAACAA CACGGTGTGT GAGGCTTTGT CGCGGGGAGT GCCGCTGGTG
GTCGCGCCGG TTCGTGACGA CCAGCCGATC ATCGGCGAGC AGGTGGTGCG GGCCGGTGCC
GGTGTGCGGG TGCGCTTCGG GCGCTCGACC CCGGTGACGC TGGCCACCGC GATCGGCACC
GTGCTCGACG AGCCGTCCCA CCGGGTCGCG GCGCGGCGGC TGCAGGGCGA GTTCAGCGCG
GCGGGCGGTG TCGTGGCCGC CGCCGACCAC ATTGAGAAGC TGCTGCCGTA G
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| Protein sequence | MGRVLFAVPP LTGHVNPAVG IAGELAARGQ EVALVGHASV VGPLVPPSVP LIALPGEISA
DQRAELEARS RPLRGPASLK FLWDEFLLPL GASMARDVGA VVERWRPDVI VADQQAVGVA
MVARRRGIRW ATLATTSAEL DDPYAVLAGV GNWVSERLRD FQVANGVPAE EAARGDLRFS
EDLTVVCSVP SLLRTASHPS HHVFVGCAAG LRRSAPEFPW EWLDRDRRTV LVSLGTVTRE
AGGRFLRAAA EALVGMSDRV QAVIVAPPGP LDDLAGQVPD DLLVRPFVPQ VDLMAGLDAI
VCHAGNNTVC EALSRGVPLV VAPVRDDQPI IGEQVVRAGA GVRVRFGRST PVTLATAIGT
VLDEPSHRVA ARRLQGEFSA AGGVVAAADH IEKLLP
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