| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5609 |
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| Symbol | |
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| ID | 5675768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6805135 |
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| End bp | 6806955 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244462 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001509866 |
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| Protein GI | 158317358 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.567176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000155826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGTGCGTC AGATCCGCCC GACGGATTCC GACAACGCGG CGGCCGCGGC CTCCGGCACG
GACGACGGCG CGGAGGGCAT CCTGGCCCGG CCGTTCCCCG GGAGCAGGAA GACCTACCTG
GTCGGGTCCC GGCCCGACCT GCGGGTGCCG ATGCGCGAGG TCGCGCTGAG CACGGGCGAC
AGCCTGGTCC TCTACGACAC CTCCGGGCCG TACACCGACC CGGGCGCCGG CGTCGACGTG
CGGCGCGGCC TGCCCGCGCT GCGGGCCGGC TGGATCGCCG CCCGCGGCGA CACCGAGGAG
ATCGAGGGGC GTGCCGTCCA GCCCGCCGAC GACGGGCGGC GCGGGCCTGA CGGGCAGGCC
GGTGACACCT TTCTCGGCTC GGGGCAGGCT CCGCGGCGGG CTACCGCCGG CCGCGCGGTG
ACCCAGCTCG CCTACGCCCG GCGGGGCGAG ATCACCGCCG AGATGGAGTT CGTCGCGCTG
CGTGAGGGCC TCTCTCCCGA GCTGGTGCGC GACGAGATCG CCGCGGGCCG GGCGGTGCTG
CCGGCGAACG TGAACCACCC CGAGAGCGAG CCGATGGCCA TCGGCCGCAA CCTGCTGGTG
AAGATCAACG CGAACATCGG CAACTCCGCC GTCGCCTCCT CCATCGAGGA GGAGGTCGAG
AAGATGGTGT GGTCGACCCG CTGGGGCGCC GACACCGTCA TGGACCTCTC GACCGGGCGG
AACATCCACA CCACCCGCGA GTGGATCATC CGGAACTCCC CCGTCCCGAT CGGGACGGTG
CCGATCTACC AGGCGCTGGA GAAGGTCGGC GGCAAGGCCG AGGAGCTGAC CTGGGAGGTC
TACCGGGACA CGGTGATCGA GCAGGCCGAG CAGGGTGTGG ACTACATGAC CGTCCACGCC
GGGGTGCTGC TGCGCTACGT GCCGATGACC GCGCGGCGCA AGACCGGCAT CGTCTCGCGC
GGCGGCTCGA TCCTGGCGGC ATGGTGCCTC GCCCATCATG AGGAGAACTT CCTCTACACG
AACTTCGCCG AGCTCTGCGA GATCCTGCGG GCCTACGACG TCACCTTCTC CCTCGGCGAC
GGTCTGCGCC CCGGCTCCAT CTCCGACGCG AACGACGCCG CGCAGCTCGC CGAGCTCGCA
ACACTGGGCG AGCTGACCTC GGTGGCCTGG GAGCACGACG TCCAGGTGAT GATCGAGGGG
CCGGGCCACG TGCCCATGCA CAAGATCAAG GAGAACGTGG ACCTGCAGCG CGAGCTGTGC
CACGACGCGC CGTTCTACAC CCTCGGCCCG CTCACCACCG ACATCGCGCC CGGCTACGAC
CACATCACCT CGGCCATCGG CGCCGCGATG ATCGGCTGGT ACGGGACGGC GATGCTCTGC
TACGTCACGC CCAAGGAGCA CCTGGGCCTG CCGGACCGCG AGGACGTCAA GGCCGGGGTC
ATCGCCTACA AGATCGCGGC GCACGCCGCC GACCTGGCGA AGGGGCACCC GGGCTCCCAG
GCCTGGGACG ACGCCCTCTC CGACGCGCGG TTCGACTTCC GCTGGGACGA CCAGTTCAAC
CTCTCACTCG ACCCGGAGAC CGCCCGGGAG TACCACGACG AGACACTGCC CGCGGCGCCC
GCCAAGTCCG CGCACTTCTG CTCGATGTGC GGCCCGCACT TCTGCTCGAT GCGGATCACG
CAGGACGTCC GCAAGTACGC GGCCGACCAC GGCCTCGACA CCGACGAGGC CGTCCAGGCC
GGATTGGCGG AGAAGTCCCG GGAGTTCGCC GAGCAGGGTG CCCGGATCTA CCTGCCGCTC
GCCGACCGGC AGACCCCCTG A
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| Protein sequence | MVRQIRPTDS DNAAAAASGT DDGAEGILAR PFPGSRKTYL VGSRPDLRVP MREVALSTGD
SLVLYDTSGP YTDPGAGVDV RRGLPALRAG WIAARGDTEE IEGRAVQPAD DGRRGPDGQA
GDTFLGSGQA PRRATAGRAV TQLAYARRGE ITAEMEFVAL REGLSPELVR DEIAAGRAVL
PANVNHPESE PMAIGRNLLV KINANIGNSA VASSIEEEVE KMVWSTRWGA DTVMDLSTGR
NIHTTREWII RNSPVPIGTV PIYQALEKVG GKAEELTWEV YRDTVIEQAE QGVDYMTVHA
GVLLRYVPMT ARRKTGIVSR GGSILAAWCL AHHEENFLYT NFAELCEILR AYDVTFSLGD
GLRPGSISDA NDAAQLAELA TLGELTSVAW EHDVQVMIEG PGHVPMHKIK ENVDLQRELC
HDAPFYTLGP LTTDIAPGYD HITSAIGAAM IGWYGTAMLC YVTPKEHLGL PDREDVKAGV
IAYKIAAHAA DLAKGHPGSQ AWDDALSDAR FDFRWDDQFN LSLDPETARE YHDETLPAAP
AKSAHFCSMC GPHFCSMRIT QDVRKYAADH GLDTDEAVQA GLAEKSREFA EQGARIYLPL
ADRQTP
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