| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5606 |
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| Symbol | |
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| ID | 5673934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6801545 |
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| End bp | 6802567 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244460 |
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| Product | 6-phosphogluconate dehydrogenase-like protein |
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| Protein accession | YP_001509864 |
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| Protein GI | 158317356 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.410608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000556999 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCTCG GAATGATCGG ACTCGGCCGG ATGGGCGCGA ACCTCGTCCG CCGGCTGATG
CGCGACGGGC ACGAATGTGT GGTCTACGAC GTGAACCCCG AGACGGTGAA GTCGCTGGCC
GCCGAGGGCG CCGTCGGCGT CAACTCGCTG GCCGACTTCG CGGCCGCGCT GAGCACCCCG
CGGGCGGCCT GGGTCATGGT GCCCGCGGGC CTGACCGGCC AGACCGTCTT CGAGCTCGCG
GAGCACTTCG AGGCCGGCGA CATCATCATC GACGGCGGCA ACTCCTACTA CCGCGACGAC
GTCGACCGGG CCGCGAAGCT CGCCGAGCGC GGCCTGCATT ACGTGGACGT CGGCACCTCC
GGCGGCGTGT TCGGGCTGGA GCGCGGCTAC TGCCTGATGA TCGGCGGCGA GCCGGAGGTG
GCCGCCCGCC TCGAGCCGCT GTTCGAGACG ATCGCGCCCG GCGTCGACAC CGCGCCGCGG
ACCCCGGGCC GGACGGGCGA GATCGCCCAG GCCGAGAAGG GCTACCTGTA CTGCGGCCCG
AACGGGGCAG GCCACTTCGT CAAGATGATC CACAACGGGA TCGAGTACGG CATGATGGCT
GCCTTCGCCG AGGGCATGGG CATCCTGGAG AAGGCCGGCA TCGGGCGTTC CGAGGCCGCC
CTGCACGACG CCGAGACGGC GCCGCTGGCC CATCCGGAGT ACTACCAGTA CGACTTCGAC
ATCGCCTCCG TCGCCGAGGT GTGGCGGCGC GGCAGCGTGG TCAGCTCCTG GCTGCTGGAC
CTGACCGCCA CCGCGCTCGC CGAGGACCCG CGGCTCTCCG AGTTCGGCGG GCGTGTCTCC
GACTCCGGCG AGGGCCGGTG GACGGTGCTG GCCGCCGTCG AGGAGGGCGT CCCGGCCCAC
GTGCTGACCG CGTCGCTCTA CGAGCGGTTC AGCTCCCGCG GCGAGTCGCT GTTCGCCGAC
AAGCTGCTGT CGGCGATGCG CAAGCAGTTC GGCGGCCACG CCGAGAAGAA GGCGGAGGGC
TAG
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| Protein sequence | MQLGMIGLGR MGANLVRRLM RDGHECVVYD VNPETVKSLA AEGAVGVNSL ADFAAALSTP
RAAWVMVPAG LTGQTVFELA EHFEAGDIII DGGNSYYRDD VDRAAKLAER GLHYVDVGTS
GGVFGLERGY CLMIGGEPEV AARLEPLFET IAPGVDTAPR TPGRTGEIAQ AEKGYLYCGP
NGAGHFVKMI HNGIEYGMMA AFAEGMGILE KAGIGRSEAA LHDAETAPLA HPEYYQYDFD
IASVAEVWRR GSVVSSWLLD LTATALAEDP RLSEFGGRVS DSGEGRWTVL AAVEEGVPAH
VLTASLYERF SSRGESLFAD KLLSAMRKQF GGHAEKKAEG
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