| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5604 |
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| Symbol | |
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| ID | 5673932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6797977 |
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| End bp | 6799758 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244458 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001509862 |
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| Protein GI | 158317354 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.969598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0026989 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGGTA CCGCCCGCCT CGACCCGGCC AGCCGGGCAG CCGCGCTGCG GCGCATGCGC
GCCGAGCCGG TGGACGTCGT CGTGATCGGC GGCGGCGTGA CCGGCGCCGG GGTGGCGCTC
GACGCGGCCA CGCGGGGCCT GTCGGTCGCC CTGCTCGAGG CCCGCGACCT CGCCGCCGGG
ACGTCCAGCC GGTCGAGCAA GCTGATCCAC GGCGGCCTGC GCTATCTGGA GCAGCTCAAC
GGCGCCCTCG TCCGCGAGGC GCTGCGCGAG CGGTCGCTGC TGCTGGAGAC GATCGCCCCG
CACCTCGTCC GGGCGATCCC GTTCCTGCTC CCACTGACCC ATCACGGCTG GGAACGCGCC
TACATCGGCA GCGGCGTGCT GCTCTACGAC ACTCTCGGGC AGGGCATCGG GCGCATCGCC
CCCCGCACGG GCGGAGACGG CGGTGCCCCC CGCAACGGGG GTGTCCCGCT GCACCGGCAC
CTGACCCGCA AGGCGGCGCT GCGTGAGTTC CCATCGCTGC GCCCCGACGC GCTCGTCGGC
GCCATCCAGT ACTGGGACGG GCAGGTCGAC GACGCCCGGC ACACCATGTT CGTCGCCCGC
ACGGCCGCCC GCTACGGGGC CCTGATCGCC ACGAGCGCCC AGGTCACCGG GCTGGTGCGG
GAGGGCGACC GGGTCGCCGG GGTACGGGTA CGCGACCTGG AGAACGGGGT CGACCTGGAG
GTCCGCGCCG CGCAGACGAT CAACGCGGCC GGGGTGTGGA CGGACGACAT CCAGGCGATG
GTCGGCGGGC GCGGGCGGCT CTCGGTGCGC GCGTCGAAGG GTGTCCACAT CGTGGTCCCG
CGCGACCGCA TCCACGGCTC GACCGGGTTG ATCCTGCGCA CCGAGAAAAG TGTCCTGTTC
GTGATCCCCT GGGGCAGCCA CTGGATCGTC GGGACGACCG ACACCGAGTG GAACCTCGAC
CTCGCGCACC CGGCCGCCAG CAGCGCGGAC ATCTCCTACC TGCTCGACAC CGTCAACCGG
GTGCTGCGCA CACCGCTGAC CACCGAGGAC ATCACCGGCG TCTACGCCGG CCTGCGGCCG
CTGCTGGCCG GCGAGTCGGA GGACACCTCG CAGCTGTCCC GGGAGCACGC CGTGGTCAGC
CCGGTCGCCG GGCTCACGAT GGTCGCCGGC GGCAAGTACA CGACGTACCG GGTGATGGCG
GCGGACGCCG TCGACGCGGC GACGGTCGGG ATGAGCCGCG CGGTGCCGCC GTCGTGCACT
GATCGTGTCC CGCTGCTCGG CGCGGACGGC TACCCGGCGC TGTGGAACGC CCGGGAGGGC
CTGGCTCGCG CCTCCGGGCT GCACGTCGCC TGGGTGGAGC ACCTGCTGCA CCGATACGGC
ACCCTCACCG AGGAGGTCCT GGCCCTCGTC GCGGACCGGG CCGAGCTGGG CCGTCCGCTG
CGCGGCGCGC CGAAGTACCT GGCGGTCGAG GCTGTGTACG CGGCGTCACA CGAGGGCGCG
CTGCACCTCG AGGACGTCCT GACCCGGCGG ACCCGCATCT CGATCGAGAC GGCCGACCGC
GGGCTGGAGG CCGCCCCCCA GGTCGCCGAG CTGATCGCCC CCGTCCTCGG TTGGAGCCCC
GCCACCGTCG GGCGCGAGAT CGATCACTAC CGGGCCCGGG TCACCGCCGA GCTCGAGTCA
CAGCGGCAGG CCGACGACCA CACCGCCGAC GCGGCCAGGC TGGGCGCTCC CGACGTCCGC
CCGGTGGTGC GGGAGGGGCG CGGCGCCGCG GCCCCGGCCT GA
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| Protein sequence | MTGTARLDPA SRAAALRRMR AEPVDVVVIG GGVTGAGVAL DAATRGLSVA LLEARDLAAG
TSSRSSKLIH GGLRYLEQLN GALVREALRE RSLLLETIAP HLVRAIPFLL PLTHHGWERA
YIGSGVLLYD TLGQGIGRIA PRTGGDGGAP RNGGVPLHRH LTRKAALREF PSLRPDALVG
AIQYWDGQVD DARHTMFVAR TAARYGALIA TSAQVTGLVR EGDRVAGVRV RDLENGVDLE
VRAAQTINAA GVWTDDIQAM VGGRGRLSVR ASKGVHIVVP RDRIHGSTGL ILRTEKSVLF
VIPWGSHWIV GTTDTEWNLD LAHPAASSAD ISYLLDTVNR VLRTPLTTED ITGVYAGLRP
LLAGESEDTS QLSREHAVVS PVAGLTMVAG GKYTTYRVMA ADAVDAATVG MSRAVPPSCT
DRVPLLGADG YPALWNAREG LARASGLHVA WVEHLLHRYG TLTEEVLALV ADRAELGRPL
RGAPKYLAVE AVYAASHEGA LHLEDVLTRR TRISIETADR GLEAAPQVAE LIAPVLGWSP
ATVGREIDHY RARVTAELES QRQADDHTAD AARLGAPDVR PVVREGRGAA APA
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