| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5595 |
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| Symbol | |
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| ID | 5673923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6784319 |
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| End bp | 6786835 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641244449 |
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| Product | FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits |
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| Protein accession | YP_001509853 |
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| Protein GI | 158317345 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0852343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00394117 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCAGACGA CGTATCTGAG AGTCGTCACC GAGGCCGGTG CCGCCACTGT GCCGGCAGGT
GAGCAGTTCA TCATCGGACG TGCTCGGACC GCGGACTACG TCATCGCCGA CAGCCGCGTC
TCCCGGCGGC ATCTGCTGGT CGAGCAGACC GGATCGGGCT GGTCCGTCCG CGACATCAGC
TCCAACGGCA CCTGGGTCGA CGGCCAGCGG ATGCCCGAGT CGGTGAGCGT ACAGGGCGAG
GTCCGGTTCC GGCTCGGCAC TCCCAGCGGG CCCGAGGTCG TGGTCATGCC CGAGTTCCCC
GCCGCGCGCG GCGGGTTCGA CGACGAGCCC GAGTACGACC CGGCCGGCTA CGACATGCAG
ACGATGCTGC CCGGCTCCAG CGGCTACCAG CCCCCGCGGC CCACCGCCCC GACCCGCGGC
CAGGGCGGCG GGCGCGGCTC GTCGTCGCCG ACCGGGCCGG CGGCCGGCGG CGGCCGTGGC
GGCAGCGGCT ACGACCCGGC ACGGACGCCG TCCGGCTCGA CGAGCCTGGA GCAGGAGCAC
GAGCGCCGGA CGACCTACCG GCTCCGGCAG GGCACGATGT CGCTGGGCCG GGCCCGCGAC
AACGACATCG TCATCACCGA CCTGTTGGCC TCCCGCCGGC ACGCCGAGCT CTACATCAAC
CGCAACGGGC TGCAGATCGC CGACCTCGAC TCGGCCAACG GCGTCTTCGT CAACGGGCGC
CGCATCAGCC GGGCGAACGT GAGCCAGGGC GACGTGATCG CCATCGGCCA CCACGTCTTC
CAGCTCGAGG GCGAGCTGCT CGTCGAGTAC CTCGACTCCG GCGACGTCAG CTTCGAGGCC
GACGCGCTCA ACGTCTGGGC CGGCGAGAAG CAGCTCATGC ACGACATGAC CTTCAAGCTT
CCCGGGCGCG CGCTGCTCGG CGTGGTCGGC CCGTCCGGTG CGGGCAAGTC GACCCTGCTC
AACGCGCTGA CCGGGTTCCG CCCGGCGGAC AAGGGCAACG TTCGCTACGC CGGCCGGGAC
ATGTACTCCG AGTACGACGA GCTGCGCCGC CGGATCGGCT ACGTGCCGCA GGAGGACCTG
CTGCACACGT CGCTCACCGT CCGCAGGGCG CTCGAGTTCG GTGCGGAGCT GCGGTTCCCG
CCGGACACCA CGAAGGCCGA GCGCCGCCAG CGGGTCGACG AGGTCCTCGC CGAGCTGGGC
CTGACCGCCC ACGCGAACAC CCAGGTGTCG CGGCTGTCCG GTGGTCAGCG TAAGCGGACC
TCGGTCGCCC TGGAGCTGCT GACCAGGCCG ACCCTGCTCT ACTTGGACGA GCCGACGTCC
GGTCTCGACC CGGGCATGGA CAAGAACGTC ATGGAGTCGC TGCGCAAGCT GGCGGACGAC
GGCCGTACGG TCGTCGTCGT CACGCACAGC GTTGCCCAGC TCGACCTCTG TGACTACGTG
CTGGTCCTCG CGCCCGGTGG CTACGTGGCC TACTTCGGCC CGCCCGGCGA CGCCCTGCCC
TTCTTCGGCG CGAAGGACTA CCCGGACGTC TTCCTCACCC TCGAGGCGAC CCCGGGTGCC
GAGTCGGCGG CCCGGTTCAG GCAGTCGCGG TACTACGTCC CGGCGTCGAT CACCGCGCCG
TCGGCGCGGC CGGCGCCCGA GGACCTGCCG TCCATCCGGC AGCAGTCGGT CGTCTCCCAG
CTCGTCACGC TGAGTCGACG GACGATGGCC GTCGTCGCCT CCGACAAGTC CTACCTACGC
CTGATCATCG CTTTCCCGTT CCTTCTCGGG GCGATCCCAC GAGCAATCCC CGGGGATCTG
GTGGTGCAAG CGGACGGGCC CAACAGAGAC GCCCCGACGG TCCTACTGGT CGTAACACTG
TGTGCCTGTT TCATGGGCAT GTCGAACTCG GTACGAGAAA TCGTCAAGGA GAGACCGATC
TATCGCCGAG AACGGGCGAT CGGCCTATCC CGGACGGCTT ATATCGGCTC GAAGGTCCTG
GTTCTGACCC TGGTCACGAC CCTGCAGGCC CTGGTGTTCA CGACGATCGC CCTGGCCGGC
CGCAAGATGG GTGAGGGGCT GTTCGGCTTC CCCTTCCTCG AGGCCGCGAT CGCCGTGATC
GCGCTGTCGC TCGCCTCGGC CATGCTCGGC CTGGTCATCT CCGCGCTGGT CGACAACGCG
GACAAGACCA TGCCGCTGCT GGTGCTCATC ACCATGGCCC AGCTGGTCTT CTCCGGCGGT
CTGGTTCCCG CGGAGGGGAC GGCCGGCCTC GAGCAGGCCA GCTGGATCGC ACCGGCCCGA
TGGGGCTTCG CCGCCCTCGC CTCGGTGATC GACCTGAACA AGATCTCCGG CTTCGGCACT
CCGATCAATC CGGACTTCCC AGCCGATCCG CTGTACGCCT TCACGAGCAG CCAGCTCCTG
TTCGACCTGG GCGGTGCCCT CGCGGTGGGC ACCGTCTGCG TCATCATCAC CTCGCTGCTG
GTGCGGCGGA TGGACCCGAA GACGTCGAAG CGCCGCCCGG CCGCTCCCGC CCGCTAG
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| Protein sequence | MQTTYLRVVT EAGAATVPAG EQFIIGRART ADYVIADSRV SRRHLLVEQT GSGWSVRDIS
SNGTWVDGQR MPESVSVQGE VRFRLGTPSG PEVVVMPEFP AARGGFDDEP EYDPAGYDMQ
TMLPGSSGYQ PPRPTAPTRG QGGGRGSSSP TGPAAGGGRG GSGYDPARTP SGSTSLEQEH
ERRTTYRLRQ GTMSLGRARD NDIVITDLLA SRRHAELYIN RNGLQIADLD SANGVFVNGR
RISRANVSQG DVIAIGHHVF QLEGELLVEY LDSGDVSFEA DALNVWAGEK QLMHDMTFKL
PGRALLGVVG PSGAGKSTLL NALTGFRPAD KGNVRYAGRD MYSEYDELRR RIGYVPQEDL
LHTSLTVRRA LEFGAELRFP PDTTKAERRQ RVDEVLAELG LTAHANTQVS RLSGGQRKRT
SVALELLTRP TLLYLDEPTS GLDPGMDKNV MESLRKLADD GRTVVVVTHS VAQLDLCDYV
LVLAPGGYVA YFGPPGDALP FFGAKDYPDV FLTLEATPGA ESAARFRQSR YYVPASITAP
SARPAPEDLP SIRQQSVVSQ LVTLSRRTMA VVASDKSYLR LIIAFPFLLG AIPRAIPGDL
VVQADGPNRD APTVLLVVTL CACFMGMSNS VREIVKERPI YRRERAIGLS RTAYIGSKVL
VLTLVTTLQA LVFTTIALAG RKMGEGLFGF PFLEAAIAVI ALSLASAMLG LVISALVDNA
DKTMPLLVLI TMAQLVFSGG LVPAEGTAGL EQASWIAPAR WGFAALASVI DLNKISGFGT
PINPDFPADP LYAFTSSQLL FDLGGALAVG TVCVIITSLL VRRMDPKTSK RRPAAPAR
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