Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5591 |
Symbol | |
ID | 5673919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6777871 |
End bp | 6778785 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641244445 |
Product | hypothetical protein |
Protein accession | YP_001509849 |
Protein GI | 158317341 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.247532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCCGCTC CGGCCGCGGA TGCCACCTTC GCGACGGACC AGGTCGCGGC CGATCTGGCC GCGACCTCAA GCACGGTCGG GTCGAAGGTC GTCTCCTTCG TCCAGACCAA GGGCACCTCC TACACCTTCG GCGTCTACGC CGATCCCGAC CTGGGCAAGG TCATCGTCGA GACCGACGCG CCCGCGCGGG ACGTGGCCGC GCGGGACGTG GCCGCGCGGG ACGTGGCCGC GCGGGACGTG GCCGCACTGC TCGGCAAGGA CGCGAGCCAG GTCGTGGTCC GCAAGGGGAA GGTCACCGAC CTGTTCAGCC GGCGCGACGA CATCCCCGCA TTCTGGGGTG GCGCCGGGAT CAGGTCCGGT GGGGCCATCT GTTCCTCGGG CTACACCGTC GCCGACTCGG CGAACACCCG CTACCAGGTG ACCGCCGGGC ACTGCGCACC CGACGGCGCG ACCGAGGTCA CGGAGCTGGG CAACCGCACC TTCGGTGTCG TCAGCGGCAA CGGTCTGCCC AGCAAGGACA TGGTGCTGCT CGGCGGTCAG CCGTACGGAT CGTTCATCTA CGGCGGCGGC GTCAACAGCA GCACCGGTTA CCACGTCGCC GGCGCCGGCA ATCCCGTCGT CGGTTTCACC AACTACTTCC ACAGCGGCCG CACGACGGGT GAGAACTGCG GGCACACCAT GCAGAGCGTC ACGGCCACCG TCTGCACCAG CAGCGGCTGC AAGTCGCCCG TGGCCGCCTT CACCGGCGGT GTCCTCCCAC AGGGCGGCGA CTCCGGCTCG CCGTTCTACG CCAACGCCAC CAGCGGCTCC GACAAGCACA TCCGCGGGCA CGTCATCGCG GGTAACGGAA CCACCTCGTA CGCCGAGCTG TGGAACAACG TCGTGGCACG CTACGGCGTA CATATCGTGA CATAG
|
Protein sequence | MAAPAADATF ATDQVAADLA ATSSTVGSKV VSFVQTKGTS YTFGVYADPD LGKVIVETDA PARDVAARDV AARDVAARDV AALLGKDASQ VVVRKGKVTD LFSRRDDIPA FWGGAGIRSG GAICSSGYTV ADSANTRYQV TAGHCAPDGA TEVTELGNRT FGVVSGNGLP SKDMVLLGGQ PYGSFIYGGG VNSSTGYHVA GAGNPVVGFT NYFHSGRTTG ENCGHTMQSV TATVCTSSGC KSPVAAFTGG VLPQGGDSGS PFYANATSGS DKHIRGHVIA GNGTTSYAEL WNNVVARYGV HIVT
|
| |