| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5579 |
|---|
| Symbol | |
|---|
| ID | 5673907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6759232 |
|---|
| End bp | 6759753 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 641244433 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001509837 |
|---|
| Protein GI | 158317329 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.542924 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAGCC CCGGCGACAC CGGCGGCGCC GCCGCCCCCC GCTTCCTCCG CGTGGGCGCG
TACGCGGTCT GCGTCCGGGA CGACCACCTC CTGCTCGCGC GCTTCAGCCC CGGTGACCCG
GCGGGGGCCC GGTGGACGCT GCCGGGCGGT GGCCTGGACC ACGGCGAGCA CCCCGAGCAG
GGCGCCATCC GCGAGGTCCG CGAGGAGACC GGGTACGACG TGGAGCTCAC CGGCCTGCTC
GGCATCGACT CGATCCATTA CCTGCAGCGG GACGGCACCG ACTTCCACGG CCTGCGGGTG
CTGTACTCGG CGCGGGTCGT CGGCGGCACG CTGCGCCACG AGATCGGCGG CTCCACCGAC
CTGGCCGCCT GGATCCCCCT GGCCGACGTG CCGGCGCTCG ACCGGATCGG GCTCGTCGAC
ATCGCCCTCG ACCTCGCCCG CGGCGCCGGC CGGATTCCCG CCGCGCCCGG TGGCGGGGCC
GACCCCGGAG ACGGGCGGCT GGCCCGGGTG GCGGGCGGCT GA
|
|---|
| Protein sequence | MQSPGDTGGA AAPRFLRVGA YAVCVRDDHL LLARFSPGDP AGARWTLPGG GLDHGEHPEQ
GAIREVREET GYDVELTGLL GIDSIHYLQR DGTDFHGLRV LYSARVVGGT LRHEIGGSTD
LAAWIPLADV PALDRIGLVD IALDLARGAG RIPAAPGGGA DPGDGRLARV AGG
|
|---|
| |