| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5562 |
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| Symbol | |
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| ID | 5673892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6741806 |
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| End bp | 6744481 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641244418 |
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| Product | ABC transporter related |
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| Protein accession | YP_001509822 |
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| Protein GI | 158317314 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.489183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGC GGGCCGTCTT ACAGTTCGCG TTGTTAGGGC TCGGTGTCGG CGGTGTCTAC
GCGGTAAGCG CGGTCGGCAT CGTGGCGATC CACCGCGGGT CGCGGACAAT CAACTTCGCG
CACGGCGGCA TCGCGCTGTG GGGCGCGCTG GTGTTCTACT GGCTGCGCGA CGACCAGGGG
ATGGCGGCCG GCCTGGCCGC GGTGCTGACG CTGCTGAGCG CCGCCGCCTT CGGCGCCGCC
GTCTACCTGC TGGTCATCCG GATCATCCGG CACCGCACCC AGCTCTCGCG GATGGTGGCG
ACCCTGGGAA TCCTCGGCAC CCTGATCGGC CTGGCGCACT CGGTGTTCGG GAGCGCCCAG
CGGGTGCCCG ACACGTCCTT CCCGTCCTCG GGCGTGGACG TGTTCGGCCA GACGATCCCC
TCCGAGCGGA TCATCATCTT CGCGCTCGCG GTCGTGGTCG TGCTGGCCCT GTCGGCCTGG
TCGGCGTGGG CGCGGCTGCC GCTGATGACG AGGGCGATGG CGGAGCACGA GTCCGCCGCC
CAGGCCCTCG GCGCGTCACC GCACCTGCTC GGCAGCCTGA ACTGGGCACT CGGATCCGTG
CTGGCCGCCG CCTCCGGCAT CCTCGTCGCC CCCATAGTGG GGCAGTTCGA CACCGCGATG
ATGACGGTGA TGGCCTTCGC CCTGGCCGCC GCCCTGCTCG GCCGGTTCGA CAGCTACCTG
CTCGCGCTGG CCGGCGGTAT CGCCCTCGGC GTTGGAGAGA GCGTGGTCAC CCACCTGGTG
GCCGAGCACG TCCCGAGCCG CTTCCAGCTC GGCTGGCCGC AGACGGTTCC CTTCGTGGCC
GTCATGGCCA TCCTCACCCT GCGCCGGGAC AGGGCCAGCA ACCGGCTGCC CGCGGTCCCC
GCCGCGCCGG TCGCGGCCGG GCTGTTCCGG CCGGTTCCCG TCGGCGTCGC GCTGGTCGGG
ATCATCGTCG TCCTGCTCGT CGGTGACGCC CGGTGGCGCG ACGCCGCGAC CCTCTCGATC
GTCTTCGGCA TCCTGGTGCT GTCGCTGGTG GTCCTCATCG GGTACGCCAA CCAGATCAGC
CTGGCGCAGA TGACGGTGGC CGGGCTCGGG GCCTACGCCG CCGTGCGACT GGACATCGAC
CACTCGCTGC CGTTCGTGCT GGCGCCGGTG GCCGGAGCGG CCGTCGGCGC GATCGCCGGG
CTGCTCGTCG GCCTGCCCGC GCTGCGGGTG CGCGGCATCA ACCTCGGCAT CCTCACCATG
GGGATGGCCG TCGCCGTCTC CGGGGTCCTC TTCGAGAGCA CCCACTACAC CGGCGGCATC
TCCGGCTCCC AGCCGCACCT GCCGACGGTG TTCGGCCTGG ACGTCGACGC CGCGCGCCAT
CCCGACAGGT ACGGGTTCGT CGCACTGTTC TGGCTGGTGG TCGCCGGTGC GGTGGTGGCC
GTCGTGCGGC GGTCCCGGCT GGGGCGCCGG CTGCTCGTGG TGCGGACGAA CGAGCGGGCC
GCCGCGTCGG TCGGCGTCAG CGTCGCGCGG GCGAAGCTGT CCGCGTTCGT GATCTCGTCG
TCCCTGGCGG GCGCGGCCGG CGTGCTGCTG GGCTTCCGCA GCTCCTCGGT CACCTTCACC
CAGTTCTCGT TCATGGAGTC GATCAACCTG GTCAGCCTCG CCGTGATCGC CGGCGTCACA
TCGATCACGG GCGGCCTGCT CGGCGGGGTG ATGGCCTTCG GAGGCCTCGT CTACCTGCTG
ATCTCCCGGC TCCACATCGG CTTCGTCACG GACAACTACG CCACCATCTT CGGCGCCGCG
CTGGTCGTGA CCGTTCTCGT GCACGAGAAC GGCGTCGCGT GGCACCGGCG GTTCCAGAAC
GACCCGGCCC CGCTCCCGCG GGGGACCCAG CCGGCGCGCG AGGGCGGCGC GCTGGTCGCG
AACGACGTGA CCGTGCGGTT CGGCGGGGTG ACCGCGGTGT CCGCCGCCAC GCTGCGCGCG
CTGCCCGGGG TCGTCACCGG GCTGGTCGGT CCGAACGGAG CCGGCAAGAC CACCCTGCTC
GACGCGATCG GCGGTTTCGC GCCGACTACC AGCGGGAGCG TGCACCTCGG CGATAGATCA
CTCAACGGCG ACGGGCCGGA CGTCCGCGCC CGCTCCGGGT TGGGCCGGGT CTTCCAGGCC
GGCGAGCTGT TCGAGGACCT GACGGTCGCC CAGAACCTGC GCGTCGCCGC GGAGAACGCC
GGCCACACCG ACGGACGGCT GCCCGCCCCG GCCCACACGG CGGTCGAGCG CTTCCGGCTG
GTTGAGGACC TCCCCCGGCT GCCCACCGAG CTGCCGATGG CCAAGCGGCG GATGGTGGGC
ATCGTCCGCG CGCTGGCCGC CAACCCCGCC GTCCTGCTGC TGGACGAGCC CGGCGCCGGC
CTGTCGATCA CGGAGATCGG CGAGCTCTCC GCGAACCTGC GCGATCTCGC GCACGAGGAG
GGCCTCGCCG TCCTGGTGGT GGACCACGAC ATGGCCCTGG TGATGTCCGC CTGCGACCGC
ATCGTCGTCC TGCACCAGGG GCAGGTCCTC GCCGACGGGA CACCGGAGGA GGTCCGGGCC
GATCCCGCCG TCCGGGAGGC CTACCTCGGC GAGGCCACAG AGGCCGTCGT GGCCTCGCCG
GACGCCGTGC TGAGCGAGGC GGCGGTGCCG GACTGA
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| Protein sequence | MDLRAVLQFA LLGLGVGGVY AVSAVGIVAI HRGSRTINFA HGGIALWGAL VFYWLRDDQG
MAAGLAAVLT LLSAAAFGAA VYLLVIRIIR HRTQLSRMVA TLGILGTLIG LAHSVFGSAQ
RVPDTSFPSS GVDVFGQTIP SERIIIFALA VVVVLALSAW SAWARLPLMT RAMAEHESAA
QALGASPHLL GSLNWALGSV LAAASGILVA PIVGQFDTAM MTVMAFALAA ALLGRFDSYL
LALAGGIALG VGESVVTHLV AEHVPSRFQL GWPQTVPFVA VMAILTLRRD RASNRLPAVP
AAPVAAGLFR PVPVGVALVG IIVVLLVGDA RWRDAATLSI VFGILVLSLV VLIGYANQIS
LAQMTVAGLG AYAAVRLDID HSLPFVLAPV AGAAVGAIAG LLVGLPALRV RGINLGILTM
GMAVAVSGVL FESTHYTGGI SGSQPHLPTV FGLDVDAARH PDRYGFVALF WLVVAGAVVA
VVRRSRLGRR LLVVRTNERA AASVGVSVAR AKLSAFVISS SLAGAAGVLL GFRSSSVTFT
QFSFMESINL VSLAVIAGVT SITGGLLGGV MAFGGLVYLL ISRLHIGFVT DNYATIFGAA
LVVTVLVHEN GVAWHRRFQN DPAPLPRGTQ PAREGGALVA NDVTVRFGGV TAVSAATLRA
LPGVVTGLVG PNGAGKTTLL DAIGGFAPTT SGSVHLGDRS LNGDGPDVRA RSGLGRVFQA
GELFEDLTVA QNLRVAAENA GHTDGRLPAP AHTAVERFRL VEDLPRLPTE LPMAKRRMVG
IVRALAANPA VLLLDEPGAG LSITEIGELS ANLRDLAHEE GLAVLVVDHD MALVMSACDR
IVVLHQGQVL ADGTPEEVRA DPAVREAYLG EATEAVVASP DAVLSEAAVP D
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