| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5556 |
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| Symbol | |
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| ID | 5673886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6731362 |
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| End bp | 6732930 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641244412 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001509816 |
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| Protein GI | 158317308 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.662967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGTA AGAAGCGATT ACTCGGCGCG GCCGTGGTCT GCGTCGCTAC CCTTGTCCTG
GGAGCCTGCG GGGGCGGTGA TTCTGACACG GCCAGCCCGG CCAGCGATGC CTCCAGCAAA
CCCGTTTCGG GTGGCGTCGC GCGAATCATC ATGACGAGTG ACCCGACCAG CCTGGACCCG
GCGTCGCTGG CCAATCAGGC ACCGATCACG GCGGTGCTGG GCAACGCCCT GTACGGCACG
TTGCTGACCA CGGACGAGAC CAGCAAGGTC GGCTACTCGA TGGCCGAGTC CTTCACCACG
ACCGACGGCG GCGCCACCTT CGAGCTGAAG CTGCGCCCTG ACCTGGTCTT CTCCGACGGT
ACGCCCCTCA ACGCCGCGGC TGTGAAGTTC AACTGGGACC GCATCAAGGA CCCGGCCACC
GCGTCGTCGA GCCTGCCGGA AGCGGCAATG GTCGCCTCGA CCGAAGTGAT CGACGACCGC
ACGATGAAGG TCACGATGAC CACGCCCGTC GCGGCGTTCG CGCAGGCGGT TGTCGGCACG
GTTCTGAACT GGGTGGCCTC GCCGGCAGCG CTGCAGAAGG GCAAGCAGTC CTTCGACGAG
AAGCCGATCG GCGCGGGACC CTTCACCCTG CAGAGCTGGA CCCGTCAGGC CGAGATCAAG
CTCACGAAGA ACCCACGCTA CTGGGACGCG CCCAAGCCCT ATCTCGACGG GATCACGCTG
CGCACGGTGC TCGACTCCAA CCAGCGTTAC AACACTCTGA CCAGCGGCGG CGCTGATGTT
TCCATCGAAA CAAACTGGAT CAACCTCGGG AAAGCTGAGG CCGCTGGCCT CCCGTCCGAC
CTGCTGCCGC TCAGTGGTGG AAACTTCCTG GCGCTCAACA CGCGCCGAGC CCCGTTCAAC
GATATCCGGG CTCGGCAGGC CGTGTCCGCG GCGCTGGACA TCGACGCGCT GAACCTGGCC
GCCTACAACG GGAAGGGCAG TGTCGCGGAC ACGCTGTTCA CCGATGCCTC ACCCTTCTAC
TCGAAGACGC AGCTGAGGTC CACCGACCGG GCGAAGGCAC AGCAGCTCTT CGACGAGCTG
GCGGCCGAGG GAAAGCCGGT GTCGTTCACC TTCTCCAGCT ATCCGACCAG TGAGAACAAG
GCGATCGCGG AGAACGTCCA GGCCCAGCTC AGCAGCTTCA AGAACGTCAA GGCCGAGGTT
GCGATCATCG ATTTCGCGAA GGGTGCCGCG CTGCGCTCGA CCCACGACTT CGACATGGTC
ATCTCGTCGG CGGCCTTCCA GGACCCCGAG CCGCGGCTGC TGGCGAACTT CACCGGGAAC
TCACCGGCCA ACATGTCCGG TCTCGCGGAC CCGGAACTGG ATGCGGCCCT GCTGGCCGGC
CGGACCGCGA CCTCGGTGGC CGATCGTAAG GCGGCCTACG ACAAGGTACA GGCGCGACTG
ACAGCGCTGA CGCCGGTCAT CTTCCTCATG CGATCGGCCC CCGGCGCGAT CGCGGCCAAG
AACGTCAACG GCCTCAGGCA GTACGGCGCC GGCTCCCTGC TGCCCGAGGA GCTGTGGATC
GAGAAGTAG
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| Protein sequence | MARKKRLLGA AVVCVATLVL GACGGGDSDT ASPASDASSK PVSGGVARII MTSDPTSLDP
ASLANQAPIT AVLGNALYGT LLTTDETSKV GYSMAESFTT TDGGATFELK LRPDLVFSDG
TPLNAAAVKF NWDRIKDPAT ASSSLPEAAM VASTEVIDDR TMKVTMTTPV AAFAQAVVGT
VLNWVASPAA LQKGKQSFDE KPIGAGPFTL QSWTRQAEIK LTKNPRYWDA PKPYLDGITL
RTVLDSNQRY NTLTSGGADV SIETNWINLG KAEAAGLPSD LLPLSGGNFL ALNTRRAPFN
DIRARQAVSA ALDIDALNLA AYNGKGSVAD TLFTDASPFY SKTQLRSTDR AKAQQLFDEL
AAEGKPVSFT FSSYPTSENK AIAENVQAQL SSFKNVKAEV AIIDFAKGAA LRSTHDFDMV
ISSAAFQDPE PRLLANFTGN SPANMSGLAD PELDAALLAG RTATSVADRK AAYDKVQARL
TALTPVIFLM RSAPGAIAAK NVNGLRQYGA GSLLPEELWI EK
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