Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5547 |
Symbol | |
ID | 5673877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6716515 |
End bp | 6717315 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641244403 |
Product | peptidase S1 and S6 chymotrypsin/Hap |
Protein accession | YP_001509807 |
Protein GI | 158317299 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3591] V8-like Glu-specific endopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCG CTGAGGGTGC CGCCGAGGAG GCTATTGATG AGAGCGTTGT TGAGGAGATC GCCCAAACGC TCGAGGTCGT CATCGGCGCG GACGACCGGG TGAGGATTCC GAATACCGAT GCGGCGTTGT GGCAACGGTA CTGCGCATTG CGAATTGAAT TCCCTAGCGG CGCAGTCTAT CGTGGTACTG GGTTCTTTAT CGGTCGGCGA ACGGTGGCAA CCGCCGGTCA CTGCGTCTAT CTACACAATC AAGGCGGTTG GGCGCGAAGG ATCGAGGTCA TCCCGGGTTG TAACGGGACT GAACGTCCGC TTGGCTCTGC GAAGGCGACG ACATTCCGGT CTACCGCCGG ATGGACGAAG GAGCGGATTC CGGCTGCCGA CTACGGGGCT ATCCTGTTGC CCGATGGCGC CTTCAAAGGA AAGAATCTCG GCAGCTTCGG ATTCGGCGTA TTCCAAACGA ACATCTTGCT GGCAAAGCCG GTAGTTCTAG CTGGATACCC AGGCGATAAG CCTTTTGCGC AACTGTGGGG GATGTCTCGA CGTATTAAGA CTGTCACGAC GACGCAGCTC GTCTACGACA TCGATTCCAT GGGCGGGCAG AGTGGTGCAC CGGTCTATTT GAAGAATAAC GGTAAGCGCT ACGTGGTTGG AATCCACAAC TATGGAGCCT CCACGGGTAA CTCTGCGACG CGGGTTACAG AGGCAGTAGC GGAAAACTTC CGGCGCTGGA GTAAGGCCAA TGTGCCAGCG GCCGCACCGG CACCGGTGCG GCCGCTGGCC ATGGCTGGCG CGGATTCCTA G
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Protein sequence | MKRAEGAAEE AIDESVVEEI AQTLEVVIGA DDRVRIPNTD AALWQRYCAL RIEFPSGAVY RGTGFFIGRR TVATAGHCVY LHNQGGWARR IEVIPGCNGT ERPLGSAKAT TFRSTAGWTK ERIPAADYGA ILLPDGAFKG KNLGSFGFGV FQTNILLAKP VVLAGYPGDK PFAQLWGMSR RIKTVTTTQL VYDIDSMGGQ SGAPVYLKNN GKRYVVGIHN YGASTGNSAT RVTEAVAENF RRWSKANVPA AAPAPVRPLA MAGADS
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