| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5534 |
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| Symbol | |
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| ID | 5673864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6703155 |
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| End bp | 6704435 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641244390 |
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| Product | integrase family protein |
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| Protein accession | YP_001509794 |
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| Protein GI | 158317286 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGC GCAAGGGGCG GCGGGGCGCC GGTGAGGGCG CGATCTACAA GGACAGCTCC
GGCCGCTGGC GGGCGACCGT AGACCTCGGC TGGAAGGACG GAAAGCGGCA GCGGAAGTAC
CTCTCGGGCA AGACCCGGAC GGAGGTCGCG GAGAAGCTGC GGGCGCTGCG TCGGGAGCAG
GAAGACGGCG TGGCTGTGGT CACCGGGGTC AAGCTGCTCA CTTTGGAAGA GTGGCTCACG
TTCTGGCTGG ACACGATCGC GGCGAGGAAG GTGCGGCCGT CGACGTTGGC GACCTACCGG
GGATACGTGC GGAACCGGAT CGTCCCGGCA CTCGGCGCGG TTCGGCTCGA CCGGCTGACC
CCGGAGCATC TCGAAGCCTT CTACCACCGG TGCGAGAAGG AAGGACTGGC GGCGGCCACG
GTGCTCCAGA TGCACCGGAT CGTCTCCCGG GCGCTGAAGG TCGCGCACCG GCGGGGGCGG
GTTGCCCGGA ACGTGGCGAC GCTGGTTGAT CCTCCCTCCG TCGACCGTGA CGAGATCCGG
CCGCTCACGG CATCGGACGC GCGGGCCGTC CTCGACGCGG CGAAGGGACA GCGCAACTCG
GCCCGCTGGT CGGTCGCCCT TGCGCTCGGA CTCAGGCAGG GTGAGGCTCT GGGGCTGGCG
TGGGACGCGG TGAAGCTGGA TGCGGCCCCG GCCACGCTGA CGGTCCGGCA GGCGCTGCAA
CGGCGGCGCT GGGAGCACGG CTGTACCGAC CCGAAGACCT GCGGCACCGC GCGCCGATGC
CCTCGTCGCA CCGGCGGTGG CCTGGTGATC GTGCGCCCGA AGAGCCGCGC GGGCCGGCGG
ACGATCGTCA TCCCCGAGAA CCTGGCGGCA AGCCTGCGGG CTCACCGTTC CGCACAGCGC
GCCGAGCGCC AGGCGGCCGA TGGCGAGTGG GTCAACGAAC ACGAGCTGGT GTTCGTCCAG
CCGAACGGGC GTCCACTCGA CCCGCGGGCG GACCACCGGG CCTGGCAGGA CCTGCTGTCA
CAGGCCGGGG TGCGCGCGGC CCGGCTGCAT GATGCCCGGC ACACGATGGC AAGCCTGCTG
CTCGCGCAGA AGGTCCACCC GCGGGTGGTC ATGGAGATCA TGGGGCACTC GCAGATCAGC
CTGACCCTCG GCACCTACAG CCACGTCGCA CCGGAGCTGT CGACGGACGC GGCGGACCGG
ATGGGCTCCG CTCTATGGGG GGAGACAACC CCGGCCACGG ACGGTGAAGA AGGCCGAAAC
CAGGAAAACG AGAAAGGCTG A
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| Protein sequence | MAARKGRRGA GEGAIYKDSS GRWRATVDLG WKDGKRQRKY LSGKTRTEVA EKLRALRREQ
EDGVAVVTGV KLLTLEEWLT FWLDTIAARK VRPSTLATYR GYVRNRIVPA LGAVRLDRLT
PEHLEAFYHR CEKEGLAAAT VLQMHRIVSR ALKVAHRRGR VARNVATLVD PPSVDRDEIR
PLTASDARAV LDAAKGQRNS ARWSVALALG LRQGEALGLA WDAVKLDAAP ATLTVRQALQ
RRRWEHGCTD PKTCGTARRC PRRTGGGLVI VRPKSRAGRR TIVIPENLAA SLRAHRSAQR
AERQAADGEW VNEHELVFVQ PNGRPLDPRA DHRAWQDLLS QAGVRAARLH DARHTMASLL
LAQKVHPRVV MEIMGHSQIS LTLGTYSHVA PELSTDAADR MGSALWGETT PATDGEEGRN
QENEKG
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