Gene Franean1_5531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5531 
Symbol 
ID5673861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6699468 
End bp6700640 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content47% 
IMG OID641244387 
Producthypothetical protein 
Protein accessionYP_001509791 
Protein GI158317283 
COG category[S] Function unknown 
COG ID[COG1479] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGAAA TCTACGACGA TAGTACTGAC TGGTTGGATT CCGAGGAAGG CCTTGACGAA 
GATGGCCAGA TTGATGAGTA TGATCTTACT TCTACGCCCA ACGATTTCAA CGTTCTGACC
ATACAAAGTT TCATCGAATC CGGGTCGGTA AAGATTCCGG GATTTCAGCG AAACTACGTC
TGGGACCTTA AGCGGGCGTC GAAACTAATC GAGTCGATTG TCATTGGCCT TCCGGTTCCT
CAGGTATTTC TCTACGAGGA GGGGCGAAAT TCGTTTCTGG TGATCGATGG CCAGCAGCGT
CTAATGACAA TCTATTACTT CGTAAGGCAG CGATTTCCAA GAAAAGAGAA AAGGGCCCAA
ATTCGCAAGG TCTTTAATGA GCATGGACGC GTTCCAGATG AAGTGCTTTA CGATGAAGAA
CTATTTGAAA ATTTCAACCT AAGGCTGCCC GAAGTATCGC CGGGAAAGCC AAATAAATTC
TCTGGACTCA ACTATGCCCG CCTAGGCGAC TATCAAACCC AATTCAATCT TCGTACAATT
CGAAATGTCA TCATAAAGCA AGTCTCGCCA GACAATGACA ATTCTTCGAT ATATGAAATA
TTCAACCGCC TGAATACCGG AGGAATAAAT CTCACTCCGC AGGAGATTCG GGCGAGCCTG
TATCACTCGA AGTTCTACGA CATGCTATTT CGAGTGAATA TGAATCCAGT ATGGAGGAAC
ATCGTCGGTC CCGGCGAGCC CGACCTCCAC GTGCGTGACC TCGAGGTGCT GTTGCGAGCG
GTAGCTATGT GGGAGCAGGG CGGCAACTAT ACGCCGTCGA TGGTGAGATT CCTGAACAAT
TATTCGAATC GCGCGAAATC TTATTCGCCG AGCGAAGTTG AGCAGGTAGA GGAAACTCTG
ACCTGGTTTT TTGATCTAGC GAGGAACATT CCGCGGTCAG CCTTCACTTC CCGTGCAAAC
AACAAATTCA GCACACCGTT GTTCGAGTCT GTATTTGCTG CTGTATGTAA CAGAAAAAGC
CCAAGGAAAG ATGTTTCGCT AGAAGCGTCG ACGGTCGAGG CAATCAAAAA TGACCCCGAT
TTTCTTCGCT ATACTACCCA GAGAACCACT GATACCTCCA ACGTAAAGGG TCGCCTAAGT
GTAGCGATGA AATACGTTGA CCGCTATGTC TGA
 
Protein sequence
MVEIYDDSTD WLDSEEGLDE DGQIDEYDLT STPNDFNVLT IQSFIESGSV KIPGFQRNYV 
WDLKRASKLI ESIVIGLPVP QVFLYEEGRN SFLVIDGQQR LMTIYYFVRQ RFPRKEKRAQ
IRKVFNEHGR VPDEVLYDEE LFENFNLRLP EVSPGKPNKF SGLNYARLGD YQTQFNLRTI
RNVIIKQVSP DNDNSSIYEI FNRLNTGGIN LTPQEIRASL YHSKFYDMLF RVNMNPVWRN
IVGPGEPDLH VRDLEVLLRA VAMWEQGGNY TPSMVRFLNN YSNRAKSYSP SEVEQVEETL
TWFFDLARNI PRSAFTSRAN NKFSTPLFES VFAAVCNRKS PRKDVSLEAS TVEAIKNDPD
FLRYTTQRTT DTSNVKGRLS VAMKYVDRYV