Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5510 |
Symbol | |
ID | 5673841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6676231 |
End bp | 6676863 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641244365 |
Product | oligoribonuclease |
Protein accession | YP_001509771 |
Protein GI | 158317263 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.15717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.933486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACAG CGACGGAAAT CCCTAATGTG AACGGGATGG ATCGCCTGGT TTGGATCGAC TGCGAGATGA CCGGCCTGGA TGCCGGTTCC GACCTGCTGC TCGAGGTCGC CTGCCTGGTG ACCGACAGCG AGCTCACCGT GCTGGACGAA GGCATCGACC TCGTGCTGGC GGCCCCGGAC GCGGCCCTCG ACCAGATGCT CCCGGTGGTC CGCGAGATGC ACGAGACCTC CGGGCTCACC GAGGCCGTGC GCGGCTCCGA CCTCAAGCTC GACGAGGCCG AGGAGCAACT CCTCAGCTAC ATCCGCCGGT TCGTCCCGGA GGCACGCAAG GCCCCGCTGT GTGGGAACTC GATCGCGACC GACCGCACGT TCATCGCCCG CTACCTGCCC CAGCTCGACA CCTTCCTGCA CTACCGCATG ATCGACGTCT CCTCGATCAA GGAGCTGGCC CGGCGCTGGT ACCCGCGGGC GTACTACGCG GCCCCGGTGA AGTCGGGCGG GCACCGCGCC CTGGCCGACA TCCGGGAGAG CATCGAGGAG CTGCGGTACT ACCGCGAGAT CCTCTTCGTG CCCCAGCCCG GCCCGACCAC TGACGCGGCC CGCGCCGCGG CCGCCGCGAT CCGCGCCTCC TGA
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Protein sequence | MTTATEIPNV NGMDRLVWID CEMTGLDAGS DLLLEVACLV TDSELTVLDE GIDLVLAAPD AALDQMLPVV REMHETSGLT EAVRGSDLKL DEAEEQLLSY IRRFVPEARK APLCGNSIAT DRTFIARYLP QLDTFLHYRM IDVSSIKELA RRWYPRAYYA APVKSGGHRA LADIRESIEE LRYYREILFV PQPGPTTDAA RAAAAAIRAS
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