Gene Franean1_5506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5506 
Symbol 
ID5673837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6670433 
End bp6671173 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content74% 
IMG OID641244361 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001509767 
Protein GI158317259 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.324567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.438631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGGG AGATCGGCCG GACCGGTCCG GAGCAACAGG GCCCGCGGCG GCGCGACTGG 
CCGTCGACCA CCCTGCTCGG GCGGCTGCCC GAACAGACCC GGGCGGCATT CGTCGGCCTG
GGCCCCTACC GTGAGTACGC CAGCGAGGAG ATCGTCCTGC GGGAGGGCGA CGGCACCAAC
TTCGTCGTGC TCCTGCTGAA CGGGTGGGTC AAGGTCACCG CCTCCACCGA GAACGGCGGC
TTCGCCCTGC TCGCCATCCG CCACGGCGGC GACCTCGTCG GCGAGCAGGC CGGCCTGGAC
GGCGAGCCCC GGTCGGCGAC GGTCACCGCG GCCGGGGCGG TGCTGGCGAA GGTGATTCCG
CTGGAGGCGT TCCTCGCCTT CCTGCGGTCC CATCCCGACG CGGGCCCTCC TGTGCTGCAG
TCCGTCAGCG CCAAGCTGCG CAACGCGACC CGGCGCCGCG TCGAGTTCGG CGGGTGCTCG
GTAGCCGTCC GGCTGGCCCG CGTGATCGTC GAGCTCGAAC GCGCCTACGG GGCCGACGCG
ACGGACGGCC CGGGGCGGCG GGTCCAGATC GCCCTCACCC AGCCCGAGCT CGCCGCGCTC
GTCGGCGCCG CCGAGCCGAC GGTGCACAAG GTACTGCGCG AGCTGCGCCA GCAGGGAGTC
GTCGATACCC GCTACCGCTC CATCGTGATC CGCGACGTCG AGGCCCTGTA CCGGGCCGCC
GGGACGACGC GCCCCCGCTG A
 
Protein sequence
MVREIGRTGP EQQGPRRRDW PSTTLLGRLP EQTRAAFVGL GPYREYASEE IVLREGDGTN 
FVVLLLNGWV KVTASTENGG FALLAIRHGG DLVGEQAGLD GEPRSATVTA AGAVLAKVIP
LEAFLAFLRS HPDAGPPVLQ SVSAKLRNAT RRRVEFGGCS VAVRLARVIV ELERAYGADA
TDGPGRRVQI ALTQPELAAL VGAAEPTVHK VLRELRQQGV VDTRYRSIVI RDVEALYRAA
GTTRPR