Gene Franean1_5505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5505 
Symbol 
ID5673836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6669610 
End bp6670335 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content76% 
IMG OID641244360 
Producthypothetical protein 
Protein accessionYP_001509766 
Protein GI158317258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.337015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.270738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAGA CGATGCCCGG CATCCGGCGG CTGTGTATCG CCGTCGCCGC ATACGACAAC 
GGCCGGGAGG GCCCGCTCCC GGAGGGCTCG CCGGCCTCTC CGCCGCTCGG GGCCGTCCTG
GACGAGACCT GCGCGGCGGC CGACGTCCGG TGCGCGCACT GGGTCAACCG GCCGACCGGG
GGCGAGCTGG CGGTGTTCCC GCCCGGCATC GACGAAGACC GGGTGGTCTC CGACTTCGTC
CGCGAGCTGC GCCGCACCCT GGTGCGGGTG AACGCGGAGT CGGCGCCGCG GCTGCGGCTG
CGGGTCGCGC TGCACCAGGG CATCACCCGC GTCGACGAGC AGGGCTACGG GGGGCGCGCG
GTGGTGAAGG CGTGCCGGCT GCGCGACGCC GACATCCTCG ACCGGGAGCT CGCGGAGCAC
CCGGAATCGG ACCTGGTGCT CATCGTCTCC GGCGAGCTGT TCGACGACGT GACCGGCGAC
GACGTGACCG GCGACACCGT GACCGGCGAC ACCGTGACCG GCGATGCAGT GACCGGCGAC
GACGTTTCGG GCGCTCATCC GCCGGACCTG TGCCGCGCCG ACTTCCGGCC GGTGACCCTG
GACGTGCCCG AGAGCGGCCA GCGTGCGCTG GCGTGGGTGC TGGCCCCCGC TCCGCCGCCC
ACCCGCCCGG CCCTCGCCTG GCGGCGCCCG GCCGAGCGCG ACACCTCCAG CCGCGCCGGG
GCCTAG
 
Protein sequence
MNETMPGIRR LCIAVAAYDN GREGPLPEGS PASPPLGAVL DETCAAADVR CAHWVNRPTG 
GELAVFPPGI DEDRVVSDFV RELRRTLVRV NAESAPRLRL RVALHQGITR VDEQGYGGRA
VVKACRLRDA DILDRELAEH PESDLVLIVS GELFDDVTGD DVTGDTVTGD TVTGDAVTGD
DVSGAHPPDL CRADFRPVTL DVPESGQRAL AWVLAPAPPP TRPALAWRRP AERDTSSRAG
A