| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5502 |
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| Symbol | |
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| ID | 5673833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6666554 |
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| End bp | 6668044 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641244357 |
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| Product | hypothetical protein |
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| Protein accession | YP_001509763 |
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| Protein GI | 158317255 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4124] Beta-mannanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0681729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.325123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACAGCG CGCGCGGCCA TCGCATCGTC CGCGCACCGA CCGGTCGTCG GCGGTCCTAC
CTGCGATCGA CGATGCTGCG TCTCGCCGTC CTCGCGCCGA CCCTGTTGGC CGGGACGACG
ATCGCCGGCA GCGGCGCGGA GGCCTTGCCG GTGCCGGGAG CCCTCATCGA GGACACGGCG
ATCGGTTCGG GGGTCTCCCA GGTCAGCTAC TTCGGCGACT GGTCGGCGTG CACGCGGTGC
GGCCCGGCCA CGCCCAACAA TAGTTACCGG GAGTCGGTCC AGCCGTCGAG CGGCGCGGTG
CTCCGGTTCT CCGGGACACA GGTTGACGTC TACGGCGTCC TGGGCCCGTC CGGGGGCGTC
GCGACGATCA GTGTCGATGG CGGGACACCG ACCGCCGTCG ACACCTACGC GGCGGCCGGT
GCGGTGAGCC GCATCTACCA GTCCGGGTTG CTCAATCCCG GGATCCACAC CGCGGTGATC
GTCAACATCG GCTGGCGCAA CCCGGCTTCC AGTGGTGTTC GGGTCGCCTT CGACCGGGCC
CAGGTGTTCG TCGAGCAGGG CGGAGGGGAT CCGGGGAACC GGTCGGGTCA GCCGTGGCTC
TCCGGGGCGA ACGGAGATCC GATCCAGAAC TCGGCGAACG TGGACACGTT CTGCGAGCGC
CGGGGCAGTC CCTGCGACCT CGCTCATGTC TTCGTCTCCC GTAACAACTG GCAGAACATC
GTGCAGCCGT CCTGGACCCA GGCGAACTTC GCCGGATGGC CGGGCCGCCT CGTCATCTCG
GTGCCTCCCT TCCCCGAGAA CTCGGGGAGC ACACTCACCG CCTGCGCATC GGGTGCCTAC
GACTCGCAGT GGCGCACGTT CGGCCAGACA CTGAACTCCA CCGGACGGCA GAACTCGATT
ATCCGTATCG CGTGGGAGGC GAACGGGAAC TGGTACCAGT GGTCGGGTAG CAACCCGTCC
GCCTATGTGG GCTGTTGGCG GCGGATCGCC GACGCCATCA ACTCCACGGC CGAGCCTGAC
CCGCTGCTCG ACTGGACCAT CAACGCGCAC TACTCGCAGA ACCCCGCGAG CCATAACCCG
CTCGACCTGT ACCCGGGCGA CGCCTGGGTG GACATCGTGG GCATCGACGC CTACGACCAC
TACCCGCCGT CCCGTACCCT CGCCGAGTTC AACAACCAGG CGAACGCGGT CGGGGGCATC
ACCTGGCTGT ACAACTTCGC CCGCGCCCAC AACAAGTTGT TCGGTGTCGG TGAATGGGGG
GTCGTGAGCG GACGTAACGA GAACGGTGCC GGGGACAACC CGAACTTCAT CCAGTTCATG
CGCGACTGGA TGAATGCGCG CGCTGGACAG GGAATGTTCT ACGAGAACTA CTACAGCACC
TGCGAGCCGC CGAATGTCGG GTCCAACCTG TACCGGCCGA CCGGGCCGTC CTGCCTGTTC
ATCAACAACG CCTCCGCCCA GCGCTACACC GATCTGTGGA GCAGCCCTTA G
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| Protein sequence | MDSARGHRIV RAPTGRRRSY LRSTMLRLAV LAPTLLAGTT IAGSGAEALP VPGALIEDTA
IGSGVSQVSY FGDWSACTRC GPATPNNSYR ESVQPSSGAV LRFSGTQVDV YGVLGPSGGV
ATISVDGGTP TAVDTYAAAG AVSRIYQSGL LNPGIHTAVI VNIGWRNPAS SGVRVAFDRA
QVFVEQGGGD PGNRSGQPWL SGANGDPIQN SANVDTFCER RGSPCDLAHV FVSRNNWQNI
VQPSWTQANF AGWPGRLVIS VPPFPENSGS TLTACASGAY DSQWRTFGQT LNSTGRQNSI
IRIAWEANGN WYQWSGSNPS AYVGCWRRIA DAINSTAEPD PLLDWTINAH YSQNPASHNP
LDLYPGDAWV DIVGIDAYDH YPPSRTLAEF NNQANAVGGI TWLYNFARAH NKLFGVGEWG
VVSGRNENGA GDNPNFIQFM RDWMNARAGQ GMFYENYYST CEPPNVGSNL YRPTGPSCLF
INNASAQRYT DLWSSP
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