| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5498 |
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| Symbol | |
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| ID | 5673829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6656776 |
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| End bp | 6657765 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641244353 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_001509759 |
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| Protein GI | 158317251 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.543403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0182886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTCGCG CGCTGATTAC GGGAATCACC GGCCAGGACG GGTTGTATCT GGGGGAGTTG
CTGGTTGGGC GGGGTTATGA GGTGTTCGGG CTGGTGCGCG GGCAGTCGAA CCCGAAGGTG
GCGACCGTGG AGCGGCTGGT GCCGGGGGTC GTGTTGTTGG AGGGTGATCT GACGGATCTT
CCGTCGTTGA TCGGCGCGGT GGAGATCTCC CAGCCCGACG AGGTGTACAA CCTGGGCGCG
ATCTCGTTCG TCGGACTCTC CTGGAAGCAG GCGGAGCTGA CCGGGGAGAC GACGGGTATG
GGGGTGCTGC GGGTTCTGGA GGCGCTGCGG ATCGCGGGCG GTAACGACCT GTCCCGGGTG
CGTTTCTACC AGGCGTCGTC GTCGGAGATG TTCGGAAAGG TGCGGGAGAC GCCACAGCGA
GAGACGACGC CGTTTCATCC ACGTTCCCCG TACGGGGTGG CGAAGACGTT CGGGCATTAC
CTGACGGTGA ATTACCGCGA GTCGTACGGG TTGTTCGCGT GTTCGGGGAT GCTGTTCAAT
CACGAGTCGC CGCGGCGGGG GATCGAGTTC GTGACGCGGA AGATTTCGCG GGCGGTGGCG
CGGATTTCAC TCGGTCTACA GGACTCGGTG TCCCTGGGGA ATCTCGAGTC GCGGCGCGAC
TGGGGTTTCG CGGGGGACTA TGTGGACGCG ATGTGGCGGA TGCTCCAGCA GGACACCCCG
GACGACTTCG TGGTGGCGAC CGGCGAGACC CACAGCATTC GTGAGTTGTT GGACGTCGCC
TTCGCCCGGG TGGGCATCGA GGACTGGTCC GGCTATGTCC GCTCCGACCC GCGGTTCTTC
CGCCCGGCCG AGGTGGATGT CCTCGTGGGC GACGCGTCGA AGGCTCGTGA GGTGCTGGGG
TGGAAGCCCC GGATCGGCTT CCACGAGCTG GTGGAGATGA TGGTCGACGC CGACCTCGCC
ACCGAGGCCG CTGCGGCGGA CAGACACTGA
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| Protein sequence | MPRALITGIT GQDGLYLGEL LVGRGYEVFG LVRGQSNPKV ATVERLVPGV VLLEGDLTDL
PSLIGAVEIS QPDEVYNLGA ISFVGLSWKQ AELTGETTGM GVLRVLEALR IAGGNDLSRV
RFYQASSSEM FGKVRETPQR ETTPFHPRSP YGVAKTFGHY LTVNYRESYG LFACSGMLFN
HESPRRGIEF VTRKISRAVA RISLGLQDSV SLGNLESRRD WGFAGDYVDA MWRMLQQDTP
DDFVVATGET HSIRELLDVA FARVGIEDWS GYVRSDPRFF RPAEVDVLVG DASKAREVLG
WKPRIGFHEL VEMMVDADLA TEAAAADRH
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