Gene Franean1_5479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5479 
Symbol 
ID5673810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6625044 
End bp6627656 
Gene Length2613 bp 
Protein Length870 aa 
Translation table11 
GC content74% 
IMG OID641244334 
Productserine/threonine protein kinase 
Protein accessionYP_001509740 
Protein GI158317232 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.915288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CTCCGCAGAG CGCGGTCGGG GTGGGTCCAG GCGAGCCGGC AGCGCCCGCC 
AGTCGGATCG AACCCGTGCG CGATGCGGTG TTTACCCCGC TGACGCCGCA CGATCCACAT
AGTGTGAGCC GATATCTGCT GCGAGCCCGG ATCGGCGAAG GCGGCATGGG CGCGGTGTAC
CTGTCGTACA CCCCCGGCGG ACGTCCGATC GCGCTCAAGG TGGCCCGCCC GGAACTCGCG
GCGGACCCCG ACTTCCGCAG CCGGTTCTCG AAAGAGGTCG CGATCGCGCG GCGGGTTCAG
GGGCCCTACA CCGTTCCTGT GATCGACGCT GATCCCGAGG CCCTGCGCCC GTGGATCGCC
ACAGCCTATG TCGCCGCCCC CTCGCTGGCG GTCGCCGTGG TGCGCCAGGG CGCGCTCCCG
TCGGCGACCG TGCTGATGCT GATCGCGGGC GTGGCCGAGG CACTGCAGTC CATACACCGG
GCGGGTGTGA TCCACCGCGA CCTGAAGCCC GGCAACGTCA TCCTGGCCGA CGACGGGCCG
CGCGTCATTG ATTTCGGTGT GGCCCGCGCC ATCGAGACAT CGACCGCGGC CATGACCCAA
ACGGGTGTAC GCATAGGAAC ACCCGCATTC ATGTCACCGG AACAGGTCCG GGGAAAGCAG
ATCGACGCCG CGGGCGATGT CTTCGCACTC GGCTCGACCG CCTATTACGC CCTGACCGGA
CGTCCCCCGT TCGGGTCAGA TGCCGCGGTG TTCCACCGCA TCGAGCACCA ACAGCCCGAC
TGGGACCACT GCCCGGACAA CGTGCGGGCG GTACTCGCCC GTTGCCTCGC GAAGGACCCG
GCGGAGCGGC CGACGTCCAC GCAGGTCATC GAGCTGTGCC GATCCGCGAT CACCGACGAC
CTGTACCTGC AGACCGGCGG CGGATGGCTG CCGCCCACGG TCGCGGCCGA GGTCACCCGG
TACCGGATCT CCACGGTGCC CTCGCCGACC GCGAGCATGT CGGCGGTCCC GCCACCCACG
TTCCAGTCGG CGCCGACGGG CGCGCCCGAC GCGATGGACG CGCTGGGCAC GCCGTTCCCG
AGCGAGCCGG GCGACAACGT CGCCGCCCCC CACTCGGCGT CGTCCTACTC GTCGGCGTCG
ATCACCCACA TCGCGCGTGC CCCCCATCCG CCCCATGCGT TCAACGCGGG GAACTCCCCG
CGGGCCCTCA ACGCGGCCCG CCAGCCACGG GCCCTGTGCG CACCCCGCGT CCCCCGCGCG
ATCGGGGCGG CGAGCGTCGC CGCCGGCGGC GCGGCCGGCG GCGCACAAGC CCTGGCCGGC
CCACCGGCCG GTGGCTCCGG TGGCCTCAGC GGCCCTGGTA GCCCTGGTGG TGCCGGTGGT
CCTGGTAGCC GTCGCGGCGC CGGTGGCCCT GAGTCATCCG GCGCACCCGG CTCGCCGGGC
GCGGCCGGTG CGTCCGACGA GCCCGGGAGG CTCGACGCCG CGGGTGCCGC GGCCGGTTAC
GACACCTCCG GTGGACTCGG AACGCCCGCC CCCAGTGCTG AGGACGGCGC GGGTATGCCG
GAGTCCGTCG CGAACGGGAT GAACGGTGCG CAGGCCGCGT TCGGGTCGTC CGCGGTTCGC
GGCGCCCTCG CGGCCGCCGG CCCCTCCGCC CCCGCGAACG CTCCGGCTCA GCCACCCGAC
AGATCCACAC CGGACGGCCC TGCCGAGCCG AGCGCTCCCG CGGGGCCGGG CACGGCCACC
GGATCTCCGG GCACCGGCTC CTCCGGCCCG GCCGCCCCAG GCGAGCAGGC CACGCCACGG
AACGCACAGG ACTCCCAGGA CTCCCAGAAC GCTCGGGACT CCGGGGGCGA GCGGGGTGCC
GGGGGCGCGT CCGGGTCAGC CGGGTCGGAC GGGCCACGGC AGGCCGGTGA CCCCGCGTCC
CCGTCCGACT CGGGCGACGG CGACCCGTCC GGGGCCCGCC GCCGCGGCCG CCGTCGGCGT
CGCCGCCTGG TGACCGTCGT GCTGGCCCTG CTCGTCACCG TCAGCGCGGT GTTCTTCTGG
CTGGCCTCCA AGCCGGCTGG CGGCGAGCCC GTCGCGCTCG TGGTCACCCC GTCGCAGGAG
GTCGGTACAG ACGGTCCGGG CTCCCCCGAA GCGTCGCCGG GCGCCATCCG CCGGGAGTCG
AGGACGACGC CGAGGGCTGC CGAAGCCTCG CCCACGGCCA CGCCGACGCC GACCGCGACT
CCCGCCCCGA AGCCGGTGAC CGGCGAGACC CCGCGGGCGG CACCCGCCGC CCCGCGGGTC
TCCCCCGCGC CCACTCAGCG GCTCAGCTGC CCCGCCAAAC CCGCCACCAG GGCCAACGGT
GACGGGACCG GCGTCCTGAT CAACGCGAGC GTCCTGCGAG AGGGCCCGGC GGACACCTGC
GGAGCGGTCG TGACGCTCGT GCGGGGCCGG AAGTTCTGGC TGTGGTGCAA CGTCGTGACG
AAGACCAACG ACACGTGGTG GTGGGCACGC CTCGACGGGA CCGAGGCCTA CGGCTGGGTC
CGGGACGACG ACATGAAGGT CGACTACACG GACGACGACG GCGACGGCAA GGTCCTCGTC
TACAGCTGCG ACGGCAAGGT CACCAAGAAG TAG
 
Protein sequence
MSDTPQSAVG VGPGEPAAPA SRIEPVRDAV FTPLTPHDPH SVSRYLLRAR IGEGGMGAVY 
LSYTPGGRPI ALKVARPELA ADPDFRSRFS KEVAIARRVQ GPYTVPVIDA DPEALRPWIA
TAYVAAPSLA VAVVRQGALP SATVLMLIAG VAEALQSIHR AGVIHRDLKP GNVILADDGP
RVIDFGVARA IETSTAAMTQ TGVRIGTPAF MSPEQVRGKQ IDAAGDVFAL GSTAYYALTG
RPPFGSDAAV FHRIEHQQPD WDHCPDNVRA VLARCLAKDP AERPTSTQVI ELCRSAITDD
LYLQTGGGWL PPTVAAEVTR YRISTVPSPT ASMSAVPPPT FQSAPTGAPD AMDALGTPFP
SEPGDNVAAP HSASSYSSAS ITHIARAPHP PHAFNAGNSP RALNAARQPR ALCAPRVPRA
IGAASVAAGG AAGGAQALAG PPAGGSGGLS GPGSPGGAGG PGSRRGAGGP ESSGAPGSPG
AAGASDEPGR LDAAGAAAGY DTSGGLGTPA PSAEDGAGMP ESVANGMNGA QAAFGSSAVR
GALAAAGPSA PANAPAQPPD RSTPDGPAEP SAPAGPGTAT GSPGTGSSGP AAPGEQATPR
NAQDSQDSQN ARDSGGERGA GGASGSAGSD GPRQAGDPAS PSDSGDGDPS GARRRGRRRR
RRLVTVVLAL LVTVSAVFFW LASKPAGGEP VALVVTPSQE VGTDGPGSPE ASPGAIRRES
RTTPRAAEAS PTATPTPTAT PAPKPVTGET PRAAPAAPRV SPAPTQRLSC PAKPATRANG
DGTGVLINAS VLREGPADTC GAVVTLVRGR KFWLWCNVVT KTNDTWWWAR LDGTEAYGWV
RDDDMKVDYT DDDGDGKVLV YSCDGKVTKK