Gene Franean1_5478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5478 
Symbol 
ID5673809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6623562 
End bp6624371 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content77% 
IMG OID641244333 
Productcobalt-precorrin-6x reductase 
Protein accessionYP_001509739 
Protein GI158317231 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2099] Precorrin-6x reductase 
TIGRFAM ID[TIGR00715] precorrin-6x reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.737923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGC GCGTGCTGCT GTTGGGCGGG ACCGCCGAGG CCCGGCGGCT CGCCGCCGCC 
CTCGCCGACC GCGCGGATCT CGACGTGGTC TACTCCCTCG CCGGCCGGCT GAGGCCCCTG
ACAGTGCCGA CGGTGCCGGC GGGGGCCACC GTCCGCAGCG GTGGGTTCGG TGGCCCGGAC
GGCCTGGTCG AGTTCCTGCG GGAACATGAC GTGGCCGCGG TGGTCGACGC GACCCATCCC
TTCGCGGCGC GGATCACGGC GGCGGCGGTC GCCGCATGCG CCGCGACCGG CGTGCCGCTG
CTGGTGGTGC GCCGTCCCGG TTGGACGGAG AGCGACGGCG ACGACTGGCG GCGGGTGCCG
TCGCTGCCCG CGGCGGCCGC GCTGCTCGCC GCTGGCCGCC CCGGCGGGCC CGGCGATCCC
GGTGAACCGG GCGAGCCCGG AGAGCGGCGC GGTCGCCGGG TGTTCCTCAC TGTGGGCCGT
TCCGGGGTCG CCGCCTTCGC CGGGCTCGAC CACTGGTTCC TGGCGCGATC CGTCGAACCG
CCGCCGGGGC CGGTCCCGCG ACGGCTGCGC GTCCTGCTCG ACCGCGGCCC CTTCACCGTG
GATGCGGAGA CCGCGCTGCT GCGCCGCCAC GAGGTCGACA CCGTCGTCAC CAAGGACAGC
GGCGGCTCAC TGACGGCGGC CAAGCTGGTG GCCGCGCGCC GGCTCCGGCT GCCGGTCGTG
ATGGTCGACC GGCCGCCGCT GCCCCGACAG GCCCGGGTCG TGGCCACGCC ATCCGCCGCG
GTCAGCTGGG TCACCGACGA GCTGCGCTGA
 
Protein sequence
MTRRVLLLGG TAEARRLAAA LADRADLDVV YSLAGRLRPL TVPTVPAGAT VRSGGFGGPD 
GLVEFLREHD VAAVVDATHP FAARITAAAV AACAATGVPL LVVRRPGWTE SDGDDWRRVP
SLPAAAALLA AGRPGGPGDP GEPGEPGERR GRRVFLTVGR SGVAAFAGLD HWFLARSVEP
PPGPVPRRLR VLLDRGPFTV DAETALLRRH EVDTVVTKDS GGSLTAAKLV AARRLRLPVV
MVDRPPLPRQ ARVVATPSAA VSWVTDELR