| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5475 |
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| Symbol | |
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| ID | 5673806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6620149 |
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| End bp | 6621549 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641244330 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001509736 |
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| Protein GI | 158317228 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.67474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.756284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCGC ACTTTGATCT CGTCGTCCTA GGCGGAGGTC CTGGCGGCTA CGTCGCGGCG
ATCCGGGCGG CCCAGCTCGG GCTGTCGGTC GCGGTCGTCG AGGAGAAGTA CTGGGGCGGC
GTTTGCCTGA ACGTCGGGTG CATCCCCTCG AAGGCGTTGC TGCGCAACGC CGAGCTCGCG
CACCTGTTCG CCCACGAGGC GAAGACCTTC GGTATCTCCG GCGAGGTGAG CTTCGACTTC
GGCGCCGCCT TCGACCGCAG CCGCCAGGTC GCCGAGGGGC GCGTCAAGGG CGTGCACTTC
CTGATGAAGA AGAACAAGAT CACCGAGTTC ACCGGCCGCG GTACCTTCCG TGACCCGAAC
ACCCTGGACG TCGCGCTCTC CGCCGGCGGC ACCGACCAGG TGAGCTTCGA CCACGCGATC
ATCGCGACGG GTTCCCGGGT CCGGCTGCTG CCCGGCGTCG AGCTCTCCGA CAACATCGTC
ACCTACGAGA CGCAGATCCT CACCCGCGAG CTGCCGCGGT CGATGGCGAT CGTCGGCGCC
GGGGCGATCG GCATGGAGTT CGCCTACGTC CTGCGCAACT ACGGCGTGGA CGTCACGATC
ATCGAGTTCC TCGACCGCGC GCTGCCGAAC GAGGACGCCG ACGTCTCCAA GGAGATCGTC
CGCCAGTACA AGAAGCTCGG CGTGCCGATC CTGACCTCGA CCAAGGTCGA GACGGTGACG
GACAACGGCT CCTCGGTGAC CGTCGAGTAC ACCGGCAAGG ACGGCGCCCG GGGCTCGCTC
GAGGTGGACA AGGTCCTCAT GTCCATCGGG TTCGCGCCCA ACGTCGAGGG CTTCGGCCTG
GAGAACACCG GCGTGGCGCT CACCGACCGC GGCGCGATCG CGATCGACGA CCACATGCGC
ACCAACGTCG AGCACATCTA CGCCATCGGC GACGTGACGG CGAAGCTCAT GCTGGCGCAT
GTCGCCGAGG CTCAGGGCGT CGTCGCGTCC GAGACCATTG CCGGTGCGGA GACGGTGATG
CTCGGTGACT ACCGGATGAT GCCGCGGGCC ACCTTCTGTC AGCCCCAGGT CGCCAGCTTC
GGTCTCACCG AGGCACAGGC ACGGGAGGAG GGCCACGACA TCAAGGTGGC GAAGTTCCCG
TTCACCGCGA ACGGCAAGGC CCACGGCCTG GGCGACCCGA ACGGCTTCGT CAAGCTGATC
TCCGACACGA AGTACGGCGA GCTGCTCGGC GGCCACCTGA TCGGCCCGGA CGTCTCCGAG
CTGCTGCCCG AGCTGACGCT GGCCCAGAAA TGGGACCTCA CCGCGCTCGA GCTCGCCCGC
AACGTGCACA CCCACCCGAC GCTGAGCGAG GCGTTGCAGG AGGCGATCCA CGGCCTCGCC
GGCCACATGA TCAACCTCTG A
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| Protein sequence | MAAHFDLVVL GGGPGGYVAA IRAAQLGLSV AVVEEKYWGG VCLNVGCIPS KALLRNAELA
HLFAHEAKTF GISGEVSFDF GAAFDRSRQV AEGRVKGVHF LMKKNKITEF TGRGTFRDPN
TLDVALSAGG TDQVSFDHAI IATGSRVRLL PGVELSDNIV TYETQILTRE LPRSMAIVGA
GAIGMEFAYV LRNYGVDVTI IEFLDRALPN EDADVSKEIV RQYKKLGVPI LTSTKVETVT
DNGSSVTVEY TGKDGARGSL EVDKVLMSIG FAPNVEGFGL ENTGVALTDR GAIAIDDHMR
TNVEHIYAIG DVTAKLMLAH VAEAQGVVAS ETIAGAETVM LGDYRMMPRA TFCQPQVASF
GLTEAQAREE GHDIKVAKFP FTANGKAHGL GDPNGFVKLI SDTKYGELLG GHLIGPDVSE
LLPELTLAQK WDLTALELAR NVHTHPTLSE ALQEAIHGLA GHMINL
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