Gene Franean1_5473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5473 
Symbol 
ID5673804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6618107 
End bp6618721 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID641244328 
Productprotein of unknown function ATP binding 
Protein accessionYP_001509734 
Protein GI158317226 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.580258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.984202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGA CCGACGCCGA CGGACTTGAC CCCGCCACGG CGATCTCCGC GAAGATCGTG 
ATCGCGGGAG GGTTCGGAGT GGGGAAGACG ACGCTGGTCA GGTCGATCTC GGAGGTGCCT
CCACTCAACA CGGAGGCGTG GATGACCGAG GCCAGCGAAG GCATCGACGA CCTGTCGATG
AGCGGTGCGA AGAGCACGAC GACGGTCGCG ATGGACTTCG GCCGGATCTC GCTGTTCCCG
GATCTGGTGC TGTACCTGTT CGGCACCCCG GGCCAGCCCC GTTTCTGGTT CCTCTGGGAC
GACCTGTCCC GCGGCGCGCT GGGCGCGGTC GTTCTCGTCG ACAGCCGCCG CCTCGACCAG
TCCTTCGCCG CGCTGAACTA CTTCGAGAAC GATTCGACGG TCCCGTACAT CGTCGCCGTC
AATCGTTTCG AGGGAAAGCT GTGGCATGAC GTCGAGGAGG TCCGGGAGGC ACTCGCGCTG
CGCCCGGACA TCCCGCTCGT CACCTGCGAC GCCCGCGAGA CGGCGTCGAC GGCCCAGGTG
CTGCGGGACC TGGTTGTTCA CACGATGTCA CTGGCCCAGG TCCCGGAACC CAGGAGGACA
CGGACGCATG CGTAA
 
Protein sequence
MIPTDADGLD PATAISAKIV IAGGFGVGKT TLVRSISEVP PLNTEAWMTE ASEGIDDLSM 
SGAKSTTTVA MDFGRISLFP DLVLYLFGTP GQPRFWFLWD DLSRGALGAV VLVDSRRLDQ
SFAALNYFEN DSTVPYIVAV NRFEGKLWHD VEEVREALAL RPDIPLVTCD ARETASTAQV
LRDLVVHTMS LAQVPEPRRT RTHA