Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5469 |
Symbol | |
ID | 5673800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6614345 |
End bp | 6615001 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641244324 |
Product | hypothetical protein |
Protein accession | YP_001509730 |
Protein GI | 158317222 |
COG category | [S] Function unknown |
COG ID | [COG5587] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02453] conserved hypothetical protein TIGR02453 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAGT TCACAGGCTT CCCCGTCGAA GCGTTGATCT TCTTCGAGGG CCTCGAGGCC GACAACAGCA AGGCGTACTG GACGGATCAT CGCGACACCT ACGAGAAGGC CGTCCGGGCC CCGATGCTCG CCCTGCTCGA CGCCCTCGAG CCGGAGTTCG GCGCACCGCA CGTTTTCCGT CCGCACAGGG ACGTTCGATT CTCGAAGGAC AAGTCGCCCT ACAAGACCGC CATTGGCGCC CACAGCGAGC GGGGTGGCTA CGTCCAGGTC TCCGCACGCG GGCTGATGAT CGCGGCCGGT TACTGGCAGA CCGCGCCCGA CCAGGTGGAG CGGCTGCGCG CCGCGGTCGC CGACGACCGG ACGGGGCCGC GGCTCGAGGT GCTGGTGCGC GAGCTGCGGG AGGCGGGGTA CGAGGTCTCG GGCACGACGC TCAAGACCCG GCCGCGGGGC TACGACGCGG ATCATCCACG CATCGAGCTG CTGCGGCATC GGACCCTCAC GGCGGCCCGT GACTTCGGTG AGCCGCCGTG GCTGGCCGAG CCGGAGTGCG CCGAGCACGT GGCGGCGGGC TGGCGGGAGA CGCGCCGGCT GACCGGCTGG CTCGACGACC ACGTCGGCGC GTCCCGCCTG CCCGCCGCCC GCCGCGGTTC CCGGTGA
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Protein sequence | MPEFTGFPVE ALIFFEGLEA DNSKAYWTDH RDTYEKAVRA PMLALLDALE PEFGAPHVFR PHRDVRFSKD KSPYKTAIGA HSERGGYVQV SARGLMIAAG YWQTAPDQVE RLRAAVADDR TGPRLEVLVR ELREAGYEVS GTTLKTRPRG YDADHPRIEL LRHRTLTAAR DFGEPPWLAE PECAEHVAAG WRETRRLTGW LDDHVGASRL PAARRGSR
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