Gene Franean1_5469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5469 
Symbol 
ID5673800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6614345 
End bp6615001 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content72% 
IMG OID641244324 
Producthypothetical protein 
Protein accessionYP_001509730 
Protein GI158317222 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGT TCACAGGCTT CCCCGTCGAA GCGTTGATCT TCTTCGAGGG CCTCGAGGCC 
GACAACAGCA AGGCGTACTG GACGGATCAT CGCGACACCT ACGAGAAGGC CGTCCGGGCC
CCGATGCTCG CCCTGCTCGA CGCCCTCGAG CCGGAGTTCG GCGCACCGCA CGTTTTCCGT
CCGCACAGGG ACGTTCGATT CTCGAAGGAC AAGTCGCCCT ACAAGACCGC CATTGGCGCC
CACAGCGAGC GGGGTGGCTA CGTCCAGGTC TCCGCACGCG GGCTGATGAT CGCGGCCGGT
TACTGGCAGA CCGCGCCCGA CCAGGTGGAG CGGCTGCGCG CCGCGGTCGC CGACGACCGG
ACGGGGCCGC GGCTCGAGGT GCTGGTGCGC GAGCTGCGGG AGGCGGGGTA CGAGGTCTCG
GGCACGACGC TCAAGACCCG GCCGCGGGGC TACGACGCGG ATCATCCACG CATCGAGCTG
CTGCGGCATC GGACCCTCAC GGCGGCCCGT GACTTCGGTG AGCCGCCGTG GCTGGCCGAG
CCGGAGTGCG CCGAGCACGT GGCGGCGGGC TGGCGGGAGA CGCGCCGGCT GACCGGCTGG
CTCGACGACC ACGTCGGCGC GTCCCGCCTG CCCGCCGCCC GCCGCGGTTC CCGGTGA
 
Protein sequence
MPEFTGFPVE ALIFFEGLEA DNSKAYWTDH RDTYEKAVRA PMLALLDALE PEFGAPHVFR 
PHRDVRFSKD KSPYKTAIGA HSERGGYVQV SARGLMIAAG YWQTAPDQVE RLRAAVADDR
TGPRLEVLVR ELREAGYEVS GTTLKTRPRG YDADHPRIEL LRHRTLTAAR DFGEPPWLAE
PECAEHVAAG WRETRRLTGW LDDHVGASRL PAARRGSR