| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5459 |
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| Symbol | |
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| ID | 5673790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6601854 |
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| End bp | 6603122 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641244314 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001509720 |
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| Protein GI | 158317212 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGCAC GACGAGGTCG CCACGCGGCC ATGGCCGGGA CGGCCGTCCT GGCCATGGCG
TTACTGACCA GCGCCTGCGG TGACGACGGA GGGAAGACCA AGCTCACCAT CAACACGTTC
GGCGTCTTCG GATACACGGA TCTGTACCGG GAGTTCGAGG CGAGCCACCC CGACATCGAG
ATCGTCGAGA CCGTCAGCGA GTACAACGAC CACCACAACA ACCTGGTCAA CCACCTCGCG
GCCGGGTCCG GAGCCGCCGA CGTCGAGGCG GTCGACGAAG GCTTCATGGC GCAGTTGAAG
GCCGCTCCGG AGCAGTTCGT CAACCTGCTC GACCTGGGAG CGGGCGACCG GCAGGCCGAC
TATCCCGAGT TCAAGTGGGC CGGATCGCTG TCGGCCGACG GGAAGACCCA GATCGGCCTG
GGAACCGACG TCGGCGGGCT CGCGATGTGC TACCGCACCG ACCTGTTCGC CGCCGCCGGG
CTGCCGACCG ACCCGGCAGC GGTCAGCGCG CTCTGGCCGA GCTGGGACGA CTACTTCAAG
ACCGGGCGCA CCTTCACCGC GAAGAACACC GGCCCGAAGT TCTTCGACGC CGGCACCAAC
ATCTACAACG CGCAGGTCTT CCAGTTCGAC GAGAGCTACT ACGCCACCGG CACACCCAAC
TTGATCGTCG GTTCGAATCC GCAGGTCAAA GCCGCCTTCG ACGCGACCGC GCAGGCCATC
GCAGACGGCC AGTCCGCCGG GCTGGTCGCG TTCGAGGACG AATGGGTGAC CGCCATGAAG
GCGGGCACCT TCGCGACGAT CACCTGCCCG GCCTGGATGC AGGGCTACAT CAAGGAGAAC
GCGCCGGACA CGGCCGGCAA GTGGAACATC GCCGCCATCC CGGGCGGGAG CGGCAACTGG
GGCGGCTCCT GGCTGACCAT CCCGGCGCAG AGCGATCACC AGGACCTGGC CTACGAGCTG
GTCTCGTTCC TGACCGCCCC GGCACAGCAG ACCCGCATCT TCACCGAGAC GGGCAACTTC
CCCTCCAGTC TCGGGGCGAT CAAGGATCCC GCGGTGCAGT CGTTCACCAA CCCGTTCTTC
GACGACGCCC CCACCGGCCG GATCTTCGGT GAATCGGCGA TCAAGCTGGC GCCGCAGTAC
CAGGGCGCGA AGCACGGCGC CGTGCGGCAG GCGATGGAAC ACGGAATCCA GCGCATCGAG
CAGGAGGACC AGGCCCCCGA CGCCGCGTTC CGGGAATCGG TCGACGAAGC GGAACGCGCG
GCCCGCTGA
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| Protein sequence | MRARRGRHAA MAGTAVLAMA LLTSACGDDG GKTKLTINTF GVFGYTDLYR EFEASHPDIE
IVETVSEYND HHNNLVNHLA AGSGAADVEA VDEGFMAQLK AAPEQFVNLL DLGAGDRQAD
YPEFKWAGSL SADGKTQIGL GTDVGGLAMC YRTDLFAAAG LPTDPAAVSA LWPSWDDYFK
TGRTFTAKNT GPKFFDAGTN IYNAQVFQFD ESYYATGTPN LIVGSNPQVK AAFDATAQAI
ADGQSAGLVA FEDEWVTAMK AGTFATITCP AWMQGYIKEN APDTAGKWNI AAIPGGSGNW
GGSWLTIPAQ SDHQDLAYEL VSFLTAPAQQ TRIFTETGNF PSSLGAIKDP AVQSFTNPFF
DDAPTGRIFG ESAIKLAPQY QGAKHGAVRQ AMEHGIQRIE QEDQAPDAAF RESVDEAERA
AR
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