| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5457 |
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| Symbol | |
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| ID | 5673788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6599209 |
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| End bp | 6600162 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641244312 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001509718 |
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| Protein GI | 158317210 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.669128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGT CCCATGCCCT TCCGGCCGCG GCGGTCCGTA ACGTACGCCC GGCGCAGGCG
GGCCCGACGA CGGCCGGCTC GCGGGCGACG GCCGGCTCGC GGGACGGGCG GCGCCGGCCG
GAGCTGGCCT CGTTCCTGCG CAGTCGGCGG GAGCGCATCA CCCCCGACGA GGTCGGCATG
CCGCCGGGGC CCCGCCGCCG CACGCCGGGC CTGCGCCGGG AGGAGGTCGC CCAGCTCGCG
GGCGTGGGCA TCACCTGGTA CACCTGGCTG GAGCAGGGCC GTCCGATCAA CGCCAGCCCG
CAGGTGCTGG ACGCGGTGGC GCGCACGCTG CGGCTCGACG CCGCCGAGCG CGAGCACCTC
TACCGCCTGG CCGACACGCC CGGGCCGCAG CCCGCCACCG ACGAGGCGCC GGCTCTGCCG
CGGGACATGC GCACCATCCT CGACAGCCTG GACCCGCTGC CCGCGTGCCT GGTCAACGCG
CGTTCCGACC TGCTGAGCTG GAACGCCACC TATGCCGTGC TCTTCCCCAT CCTCGTGAAC
GCCTCCGCCC TCGCACGGAA CTCGATCTGG TTCGCGTTCA CGACCCCGCG CTGCTGCAAC
CCGCTGGTGA ACCTGGACGA ACAGGCACCC GAGCACGTCG CGATCTTCCG GTACCGGTAC
AGCCAGCACA TGGACGACCC GGGCTGGCAG GAGTTCGTCC AGCGGCTGTG CGCGGCGAGC
GCCGAGTTCG CCCGGCTGTG GGCGACGCAC GACGTGGCCC CGCCGCGGCC CTGCGACAAG
GTGTTCCACT ATCCGGCGGT CGGGGACATC GCGACCCGCT CCACGAACCT GGACCTCACA
GCCCTGCCCG GCACCCGAAT GGTCATCTAC ACCCCGGTCG ACGACGAGAG CCAGGCCAAC
ATCGCCTGGC TCCGCGACCA TCCCGAGGCG ACTGTCCCGG ACCACCAGCA CTGA
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| Protein sequence | MTQSHALPAA AVRNVRPAQA GPTTAGSRAT AGSRDGRRRP ELASFLRSRR ERITPDEVGM
PPGPRRRTPG LRREEVAQLA GVGITWYTWL EQGRPINASP QVLDAVARTL RLDAAEREHL
YRLADTPGPQ PATDEAPALP RDMRTILDSL DPLPACLVNA RSDLLSWNAT YAVLFPILVN
ASALARNSIW FAFTTPRCCN PLVNLDEQAP EHVAIFRYRY SQHMDDPGWQ EFVQRLCAAS
AEFARLWATH DVAPPRPCDK VFHYPAVGDI ATRSTNLDLT ALPGTRMVIY TPVDDESQAN
IAWLRDHPEA TVPDHQH
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