Gene Franean1_5453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5453 
Symbol 
ID5673784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6596162 
End bp6596680 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content69% 
IMG OID641244308 
Producthypothetical protein 
Protein accessionYP_001509714 
Protein GI158317206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.262975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGCGT CGGGGCGCAT CCCGTTGGAC CGGACCCGGA CGAGCATCGG CCCGATCTCG 
GTGGAGATCG TCGAGCCGCT TCGGGTCAAC CGCATCCTGG TCGACGCCGC GGAACACGGG
CTGGTCGCCG ACCTCACCGC CACCGCCCGT ACGCCGGCTC ACGAGGAGCC GCGGGCCACG
CAGTATGACG GGACCGAGCT CCGCACCGAC TCCACCCGGG CCACCCAGAT GGTGACCTGG
ACCGCTCTGC CGCAGGTGTT CTTCCTGCGG GCGCCGCTGA ACTTCGCCGA CGAGTGCCTG
CACTACGTGG TGATGGAGAA CGAGGCGGGG CAGCCCTGGC TGGAGCGCAC CGCGGTGCTG
CCCGTGCTCG GCGAGGAATC ACCGGTCTTC GGAATGGGGA CACGGCCGAT GGCACGACGA
ACTTGCCGTG GGTGGCGAGA CCTTCAAGGT GGCGGAACTG GACACCATTG CTCCCGACTG
TGTGCACGTT CAGCAGGTCG TACGCGCGGT CTGGGGTGA
 
Protein sequence
MFASGRIPLD RTRTSIGPIS VEIVEPLRVN RILVDAAEHG LVADLTATAR TPAHEEPRAT 
QYDGTELRTD STRATQMVTW TALPQVFFLR APLNFADECL HYVVMENEAG QPWLERTAVL
PVLGEESPVF GMGTRPMARR TCRGWRDLQG GGTGHHCSRL CARSAGRTRG LG