Gene Franean1_5434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5434 
Symbol 
ID5673765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6572396 
End bp6573445 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content67% 
IMG OID641244289 
Productguanine-specific ribonuclease N1 and T1 
Protein accessionYP_001509695 
Protein GI158317187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.780394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.158249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACG GCGATCCCTC TCCTCGCGAA CCGCGGAACG CAGATCAGCA AGGTTCAGTG 
AGGAACCAGG AACCGCAGGG GCTGGAGCCG CCAGGACGCG GTCTTGAGTC GACGCCCGAG
TTCCAGTCCC ACCTCGATGA CCGCAAGGCC GCCATGGAGG AGAGGTCCTC CGGCGGAGCC
GGCCCCGGCG CCGACCCGCT GTCCCGGTCC GAGGAAGGCG TCGAGTCCGA GCCGGCAGTC
CGGACGGAGC AGGGCAATGA GTTCCGGCCA GCGGTCCAGC CCGAAGCTGG GCCGGACATC
CGGAACGCAA CTGATGCGCC CGATGCATCC ACTGCGCCCG GTATGCGAGG GACACCTGAG
GCGCCTGCGC CTGCCGCCCG AGTCGAGCAG CCGGACGGGC AGGACCCAGT AGACGTCCAG
AACGACTCGG AGTCCCTGAC CGCGCCCGAT TCCAGCAGCG TGCGCGACCG TCCGCAACCG
TCCCGCCAGG AGTCCGTTGA CGAGGCGCCT TCGCCCACCA TCGTCAACGA CGGCACGGTC
CACGAGAACG ACCCCTCCGG CAGCCCGTTG TCTGTCGAAG CAGACCCCGA CCCGACGACC
AGCACCGATG GCGAGACTGC CGAGGATCTG CTGCCGGATC CCGGCACCGA CGGCACCGAC
GGCACCGACG GCACCGACGG CCCGGAAAGC TCGGACGGCC GTGACGGCGA CGCCGATCAT
GAAAGCGATG ATCGTGACAT CCCCTGGGGA GGCGAGCCTG AGGTCACCGG CCCGGCAGAC
GGCGTTGATG GTGTGAAGGC AGATGCGGTT CCCCGTAAGC CATACAACGG CCTGACGGCC
GGCGAATACT CCGGTGGCAC CGCCTACAAG AACAGATCGG ATCCGAAGCT ACCCGAGACC
ACTGAGGATG GCACGCCCAT CAGGTACAAG GAGTACGACC GCGACCCGTA CGACGGCGTA
CAGAGAAATG ATCGGCGATT CGTCGTCGGC GACGACGACG CGCATTACTA CACCGACGAC
CACTACCAGA GCTGGGTGAG GTTCCGTTGA
 
Protein sequence
MLDGDPSPRE PRNADQQGSV RNQEPQGLEP PGRGLESTPE FQSHLDDRKA AMEERSSGGA 
GPGADPLSRS EEGVESEPAV RTEQGNEFRP AVQPEAGPDI RNATDAPDAS TAPGMRGTPE
APAPAARVEQ PDGQDPVDVQ NDSESLTAPD SSSVRDRPQP SRQESVDEAP SPTIVNDGTV
HENDPSGSPL SVEADPDPTT STDGETAEDL LPDPGTDGTD GTDGTDGPES SDGRDGDADH
ESDDRDIPWG GEPEVTGPAD GVDGVKADAV PRKPYNGLTA GEYSGGTAYK NRSDPKLPET
TEDGTPIRYK EYDRDPYDGV QRNDRRFVVG DDDAHYYTDD HYQSWVRFR