| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5433 |
|---|
| Symbol | |
|---|
| ID | 5673764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 6571911 |
|---|
| End bp | 6572399 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641244288 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001509694 |
|---|
| Protein GI | 158317186 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.214095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.245344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGACAAG ATCCACTGGA AGCGATCGGA AGCGGTCTGT TCGGTGGTGT TCACGCAGTG
CCGGTCGACG GACTCGCGGC GACCGGTCGA CTGGTTGCCG AGCTTTACCA CAAGCTCGAC
CTCAGGACGG CCTCGCCACG AGTGCGGACG CTGCACGTCC GCGGCTCACG CTGTCGCACC
TCCGCTGGTC TGTTTGACGA ACTGGCAGCG GTTCTCCAGT TTCCCGCCTA TTTCGGTGGT
AACTGGTCGG CTCTCCATGA CAGCTTGTAC GACTTCCAGG TACCGGCCGA CGCTGTCATC
CTCGTGTTTT CCGACTTCTC CCAGGTGCTG TCCGAGGCCA AGAAGGAGGA GCTCGACTGG
CTTCTCGAGG AGCTGACCGA GCTCTGTGGC GCGCCGCGGA CACCCGCTCC CGGAGACCGA
AGTGTCACGG CCCTTCTAAC CGATCGTGCC GCGGGACTTT CCGTCGTCAC AAAGCTGCTG
CCGGGCTGA
|
|---|
| Protein sequence | MRQDPLEAIG SGLFGGVHAV PVDGLAATGR LVAELYHKLD LRTASPRVRT LHVRGSRCRT
SAGLFDELAA VLQFPAYFGG NWSALHDSLY DFQVPADAVI LVFSDFSQVL SEAKKEELDW
LLEELTELCG APRTPAPGDR SVTALLTDRA AGLSVVTKLL PG
|
|---|
| |