Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5432 |
Symbol | |
ID | 5673763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 6571191 |
End bp | 6571868 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641244287 |
Product | deoxyribonuclease V |
Protein accession | YP_001509693 |
Protein GI | 158317185 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.661836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.145859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCAGG TCGAGGACGC TGAGGCGCTG CAGGCCGAGC TGTGTCGGCT TGTCCAGGCT GACGCATCCG GCCCGGACTC GGTCACGACG GCGGCGGGTT GTGACGTCGC GTACGACTCC GACTCCGATC TGGTTGCGGC CGCGGTCGTC GTCCTCGCCG CGCCGGGCTG GGAGGTGATC GCATCGGCTA CGGCGGTAGG TCGGGCGGCG TTTCCCTACA TTCCGGGTCT GCTGTCGTTC CGGGAAATGC CGCCGCTGCT CGAAGCGTGG AAAACCGTTC TGCCGCAGTT GGCTGCGCCG CCAGAGCTGC TGGTGTGCGA CGGGCATGGC ATCGCACACC CCCGACGGTT CGGACTGGCC TGTCATCTCG GTGTCACCCT GAACCTGCCG ACGGTCGGCG TGGCAAAGAC CCAGTTTGTC GGCGAGCACT CGCCGCCTGG GCCGCGTCGG GGAGACCGAA CGGCGATCAT TCTCGACGGC GAGCCGGTGG GAGCCGCGCT GCGGACCCGC GACGGTGTCC GCGAGGTGTA CGTCTCGGTC GGGCACCGCA CCAACCTTGA CTCCGCCTGC CGGTGGGTAC TGGAGCTGTG CCCCAGGTAC CGGCTGCCGG AGACGACCCG GGCGGCCGAT CAGCTCAGCC GAAGGGCGCT TGCCGAAGCC CAGACCGCGT CTCGCTGA
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Protein sequence | MRQVEDAEAL QAELCRLVQA DASGPDSVTT AAGCDVAYDS DSDLVAAAVV VLAAPGWEVI ASATAVGRAA FPYIPGLLSF REMPPLLEAW KTVLPQLAAP PELLVCDGHG IAHPRRFGLA CHLGVTLNLP TVGVAKTQFV GEHSPPGPRR GDRTAIILDG EPVGAALRTR DGVREVYVSV GHRTNLDSAC RWVLELCPRY RLPETTRAAD QLSRRALAEA QTASR
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