Gene Franean1_5431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5431 
Symbol 
ID5673762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6570462 
End bp6571103 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID641244286 
ProductDSBA oxidoreductase 
Protein accessionYP_001509692 
Protein GI158317184 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.144454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCG AAGTCTGGTC CGACATCGTC TGCCCGTGGT GCTACATCGG CAAGCGACGG 
CTGGAGAAGG CACTTACCCG GTACGAGCAC GCAGACGAGG TCGAGGTCGT CTGGCGCAGC
TTCCAGCTCG ACCCGACGCA GCCACGCGGG GAGAACATCC CGACCTCCGA GATGCTCGCA
CGTAAGTACG GCGTCACCCC GCCCGAGGCC AAGGCCATGA ACGACCGCGT CAGCGCACTG
GCCGCCGAGG AAGACCTGAC CTACCACCTC GACCGGGCCG TCACCGCCAA CACCTTCGAC
GCGCACCGCC TCATCCACTT CGCCGCCACG CACAACCTCG CCGGCGCGAC GCAGGAACGG
TTGATGCGCG CCACCCTGAC CGACGGCGCG GCCGTCGACG ACACGGACAC GCTCGTCCGA
CTCGCCACCG AAGCCGGCCT GCCGGCAGAC AGAACCCGCG AAGTCCTCGA CGGCGACGCG
CACGCCGACG ACGTCCACGA CGACATCCGC CAGGCCCGCG CGCTCGGTAT CAGCGGCGTG
CCGTTCTACG CCGTCGACCG CACCTACGGC ATCTCCGGCG CCCAGCCGGT GGAGACCATC
CTGGATGCCC TGCGCCGAGC ATCGTCCCCG GTCGCGTCCT GA
 
Protein sequence
MKVEVWSDIV CPWCYIGKRR LEKALTRYEH ADEVEVVWRS FQLDPTQPRG ENIPTSEMLA 
RKYGVTPPEA KAMNDRVSAL AAEEDLTYHL DRAVTANTFD AHRLIHFAAT HNLAGATQER
LMRATLTDGA AVDDTDTLVR LATEAGLPAD RTREVLDGDA HADDVHDDIR QARALGISGV
PFYAVDRTYG ISGAQPVETI LDALRRASSP VAS