Gene Franean1_5413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5413 
Symbol 
ID5673744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6530232 
End bp6531200 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content64% 
IMG OID641244268 
Producthypothetical protein 
Protein accessionYP_001509674 
Protein GI158317166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0414957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TGCTGGCCCC GATGCCGCTG TCGTCATGGG CAGGCACCAA AGAGACGCTG 
CACCGGTACG TGCAGGTCGT AGGAAAGATC CGGCTGAGCG CCAGCCCACG TCGGAACCAC
TGGTGGAACG TCCCGTTCCA CCTCACCGGC CGCGGTATCA CGTCCCGTCC GATGGGCCTC
GTCGACGGTA ACCCGATTTT CACGATCGAC TTCGACTTCG TCGGACACAA CCTCGTCGTA
CACAGGCTGG ACGGCGAGGC GGTGTCGTTC CCGCTCGCGG GGCGATCGGT CGCATCCTTC
TACCATCAGA CGCTCGAGGC GCTCGGAGCG CTCGGCATCA CGGTGCACAT CGACCATCCG
CATCCCTTCG ACCTTCCCGA CTCCGCCCGG CCGTTCCAGG ACGACACGGA ACACGCCGCG
TACGATCCGA CACAGGTGAC GCGCTACTGG CAGTTGCTCA GTCAGGTCAA CCTGATCCTG
GAGGAGTTCG CCGGCGGCTT CTCCGGCAAG GTCAGCCCGG TGCACCATTT CTGGCATACG
TTCGACCTAT CCCATACCCG CTTCAGTGAC CGCCGGATCG ACCAGCCTAC CGACGTCGAC
CCGGTGACGC GCGAAGCGTA CTCACGTGAG GTCATCAGTT TCGGATTCTG GTTCGGCGAC
GCGTCCATAC CCGAACCGGC CTTCTATTCC TACACCGCTC CCGAACCCGC CGGAATCACC
GACGGGCGGC TACGACCAGA CGCTGCTCTC TGGACGCCAC GCGGCAGCAG CCACCTCGCG
GTACTACCCT TGAGCGCCAT TCAGGACAGC CCCGACCGAC GGGGCACAGT CCTCGACTTC
TACGAGAGTG CCTACCGCGC CGGAGCAACC CGAGCCGGAT GGGATATCGA CCGGCTTACC
TGCCCACATG GCATCACCGA CCCCCAGCTG GCTCCCACCA TGGCATCCAC CGGCAGCGCC
ACGCGGTAA
 
Protein sequence
MIELLAPMPL SSWAGTKETL HRYVQVVGKI RLSASPRRNH WWNVPFHLTG RGITSRPMGL 
VDGNPIFTID FDFVGHNLVV HRLDGEAVSF PLAGRSVASF YHQTLEALGA LGITVHIDHP
HPFDLPDSAR PFQDDTEHAA YDPTQVTRYW QLLSQVNLIL EEFAGGFSGK VSPVHHFWHT
FDLSHTRFSD RRIDQPTDVD PVTREAYSRE VISFGFWFGD ASIPEPAFYS YTAPEPAGIT
DGRLRPDAAL WTPRGSSHLA VLPLSAIQDS PDRRGTVLDF YESAYRAGAT RAGWDIDRLT
CPHGITDPQL APTMASTGSA TR