Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5411 |
Symbol | |
ID | 5673742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6527763 |
End bp | 6529334 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641244266 |
Product | hypothetical protein |
Protein accession | YP_001509672 |
Protein GI | 158317164 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02946] acyltransferase, WS/DGAT/MGAT |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0824617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTC GGCCGCTTAC TCCGATGGAC GCGCTCATAC TCGGATACCA GCGAGCATTT CCGAAGACGC CGCTCGCGGT CGGTTGCCTG TTGGTCGCCG ACGGCCCCGT GCCAGGAGTC CAGGCGTTGC GCGAGCTCGT CGCGGACCGG GCACACGACT TTCCTCCACT GGCCCACCGG ATCGCCTCGG CCGGGCGTGG CCGGCCGGTC TGGGTGGCGG ACGCCGATTT CGACCCGGCC CGGCACGTTC ACGAGTACCG GCTCCCCGCG GAGTCGGGGC TCGCCGGACT GCGCGAGGCG GTGGGGCGGC TGTCAGCGGT CGAGATCTCG TTGGACGCGC CGCCGTGGCA GCTCTGGTTG CTCCACGGCC TCCGCCGCAA CGGCTTCACC CTGCTGTACC GCGCCAGCCA CGTGTGGACA GACGGGACGG CACTGAACCT GGTGCTGGAA AAGCTGTTCG GCCTGTCCGA CCCAGGATCG GAGCGCGCAC CTCTGCGGGT GTCGCCGGAT CGCCGGCCCG GCCCCCGAAC CGTCTGTCGG GCCGCCACTC ACTCACTCGG ATGGCTTACC CGGACGTCCA CGATCGGTCC GCTCTCGGCG GCACCCACGG GATACCCGCA CCACACCTGG CTGGAGGTGG ACCTGTCCAG GCTACGGGCG ATCAGCCGCG CCTACGAGGT CACCGTGAAC GACATCTTCC TGGCCGCGCT CACCGGCGCT CTGCGTGCCT GGCCGCGCCC CGGCTCCGAT CGGCCCGGCC AGCGCCGGGG CCAGATGCAC GCCGCGATGC CGGTCAGTAC CCGCCGGGCA GCCCAGCGGG ACCACATGAG CAACTACCTG ACCACCGTAC GGATCGCGCT GCCTTACGGT GAGTCGTTGA TCCACCGGCG TGTGGAGGCG ATCCACCGGC AGACCGTCCG ACACAAGCGG GGCGGGACTC CGGGCGTCGC GGAACATCTC TTCCTCTGGG CGATTCCCGA ACCGTTGCGA CCGGCCGTGC TGTCCACCGG GATCATGTCC CACGTCTTCG CGCTGACCGC ATCCAACCCG GGCGGCCTGA CCGGCCCGCT GGAAATCCTC GGCCGACCAG TCACCGCCGC CGTGCCCACC CCTCCGCTCC CCGCAGGCCA ACGCCTGGCA GTCCTGCTCG GCGGGCTGGA CGGGCAGGCG TGCATCGGTT TCACGATGGA CGGGTCGGTG CGGGACGGGG CGCGACTGCC GGAACTCGTC GAGGCCGAAC TGGACGCGCT CGAGGCAGCG GCCGGCCTCC GCCACGGCCC GGCCCGGAGC CCGGCCGAGA CCACGCATTC GGCACGGCCG CATCCGGTCG CCATGACCGG TATCGGCACC AGCGCTATCG AGGCGGCGGG TCTGGTGGGG CGCGGTGCTT ATCACCTTCG TCGCTGGCTC ACACGGGGCC AGCGGACCGA CACGCCTGGC ACGGAACTGG TTCAGGGCAC CAGCGACGCG GCAGGTCGAA CGCCCTACAG TCAACTCTGC TCCCGACGGC TCCAGCAACC CCGGCCAGCC GGTGCTTCGC CAGCAGAGGA GAGGCGAGTA CTACATTCCT AG
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Protein sequence | MTARPLTPMD ALILGYQRAF PKTPLAVGCL LVADGPVPGV QALRELVADR AHDFPPLAHR IASAGRGRPV WVADADFDPA RHVHEYRLPA ESGLAGLREA VGRLSAVEIS LDAPPWQLWL LHGLRRNGFT LLYRASHVWT DGTALNLVLE KLFGLSDPGS ERAPLRVSPD RRPGPRTVCR AATHSLGWLT RTSTIGPLSA APTGYPHHTW LEVDLSRLRA ISRAYEVTVN DIFLAALTGA LRAWPRPGSD RPGQRRGQMH AAMPVSTRRA AQRDHMSNYL TTVRIALPYG ESLIHRRVEA IHRQTVRHKR GGTPGVAEHL FLWAIPEPLR PAVLSTGIMS HVFALTASNP GGLTGPLEIL GRPVTAAVPT PPLPAGQRLA VLLGGLDGQA CIGFTMDGSV RDGARLPELV EAELDALEAA AGLRHGPARS PAETTHSARP HPVAMTGIGT SAIEAAGLVG RGAYHLRRWL TRGQRTDTPG TELVQGTSDA AGRTPYSQLC SRRLQQPRPA GASPAEERRV LHS
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