| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5395 |
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| Symbol | |
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| ID | 5673727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6508769 |
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| End bp | 6509977 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641244251 |
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| Product | integrase family protein |
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| Protein accession | YP_001509657 |
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| Protein GI | 158317149 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGTCCG CACCGCTGCT TGATCCTAAA ACGAGTATTT CGGCAGTCTC GGGCTCTGCT
GACGGCGCGG CCTACGTGCT GATGCCGGAC GGTACGACGA AGCGGCGGCC GGTCTACGGC
AAGTCGGAGG AGATCGTCCG CGGCAAGCTC ACCGAACTTC AGGCCAACTC CGACCAGGGA
ATCCCGGCGG ACGCCACTGG GTGGACGGTC GAGCGGTACC TGACGGCCTG GCTTGCTCAG
ACCGTGAAGC CGAACCGCCA GCCGAACACG TACGTGACCT ATGAGAAGGC GGTCCGGATC
TACCTCGTGC CGGGTCTCGG GAAGAAGCGG CTGAACAGGC TGACGGGCGC GGACGTCCGG
CAGTTCATCC GGCGGACGGA GAGTACCTGC CGGTGCTGCG CGCGGGGTGT GGACAAGGCC
CGGCCGGAGG GGGAGCGGCG TTGCTGCGAT CGGCTGCCGT CGAAGCGTCA GGTTCAGGTC
GTGCATGCCG TGCTGCGTAA CGCGCTTCAG GCGGCCGTCC GGGAGGAGTT GATCCGGCGG
AACGTCGCGA AGCTGGTGCA GGTCTCGACT CCGCGCTACG GCGTCGACCG CGGCCTGACG
GTCGAGCAGG CGCATCAGCT CCTCGACGCG GCGGCCGGCG GCCGGTTGTA CGCGCTGCTG
GTCCTGGCGC TGTTCCTCGG GATGCGGCGC GGGGAGCTGC TCGGTCTGCA GTGGTCGGAC
ATCGACTCTG AGCGGGAGAC GCTGACGGTG CGTCACACGC TGCTGCGGGT CGGCGGGGAG
CTGAGGCTGT GCCCGCCGAA GACGGAGGAC TCCGAACGCA CGCTGCCGCT CCTCGGTCTG
GTCGCGGATG CGCTCGCCGA GCATCGCAAG CTCCAGGACG CGGAACGCGA CGCGGCCGGC
GACGCCTGGG TGCAGACCGG TCACGTGTTC ACGACGAAGA TCGGGACTCC GATCGAGCCG
GACAACCTGC GCCGGTTCTG GATGCCGCTG CGCCGTGCGG TCGGTCTCGA CGGGGTGGTG
TTCCACGGGT TGCGGCACAC CTGCGTGACG TTGCTCCTGG ACCTTGGTGT GCCGCCGCAC
ATCGTCCGCG ACATCGCGGG CCACTCGGCG ATCGAGGTCA CGATGACGAT CTACGCGCAC
GCCTCGATGG GGGAGAAGCG CCGCGCGCTG GGCAAGCTCG ACGGCCACCT GACCGAACCC
CGACCCTGA
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| Protein sequence | MRSAPLLDPK TSISAVSGSA DGAAYVLMPD GTTKRRPVYG KSEEIVRGKL TELQANSDQG
IPADATGWTV ERYLTAWLAQ TVKPNRQPNT YVTYEKAVRI YLVPGLGKKR LNRLTGADVR
QFIRRTESTC RCCARGVDKA RPEGERRCCD RLPSKRQVQV VHAVLRNALQ AAVREELIRR
NVAKLVQVST PRYGVDRGLT VEQAHQLLDA AAGGRLYALL VLALFLGMRR GELLGLQWSD
IDSERETLTV RHTLLRVGGE LRLCPPKTED SERTLPLLGL VADALAEHRK LQDAERDAAG
DAWVQTGHVF TTKIGTPIEP DNLRRFWMPL RRAVGLDGVV FHGLRHTCVT LLLDLGVPPH
IVRDIAGHSA IEVTMTIYAH ASMGEKRRAL GKLDGHLTEP RP
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