Gene Franean1_5388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5388 
Symbol 
ID5673720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6497166 
End bp6497600 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content66% 
IMG OID641244244 
Producthypothetical protein 
Protein accessionYP_001509650 
Protein GI158317142 
COG category 
COG ID 
TIGRFAM ID[TIGR00026] deazaflavin-dependent nitroreductase family protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGA GCGACTTCCA ACTACCTGAC CGGACCCTGC TCGGCGCGGA ACACGTCCGC 
CGTTACCGGG AGACCGACGG CGAGGTCGGC TACCTCTGGA ACACCGTCCC GATACTGCTG
CTCACCACGA CCGGCCGGCG CACCGGCGAG GCACGTACCA CGCCGCTCAT CTTCGGGCGC
GACGACGACG ACTACCTCGT CATCGCCTCC ACCGGCGGCT CACCTCGGCA CCCAGCCTGG
TACCTGAACC TCACCGCAAA TCCTCGAGCC GAGATCCAGA TCCGAGCCGA CCACATCGCG
GTGACCACCC GCACCGCAAC CGAGCAGGAA AAGCCACGGC TATGGAGGAT CATGGCCGAC
ATCTGGCCCA ACTACAACGT CTACCAGCGA CGTACCGAGC GAGTGATCCC CGTCGTCGTA
CTCACCCCTG CCTAG
 
Protein sequence
MAESDFQLPD RTLLGAEHVR RYRETDGEVG YLWNTVPILL LTTTGRRTGE ARTTPLIFGR 
DDDDYLVIAS TGGSPRHPAW YLNLTANPRA EIQIRADHIA VTTRTATEQE KPRLWRIMAD
IWPNYNVYQR RTERVIPVVV LTPA