Gene Franean1_5333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5333 
Symbol 
ID5673667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6423208 
End bp6423678 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID641244191 
ProductNUDIX hydrolase 
Protein accessionYP_001509597 
Protein GI158317089 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.66797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0715353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCGAA TCGACTACTT CAACGACCCG AACGCCCCCA AGGCGAACAG CGTCGTCCCC 
TCCGTGACCG CCGTCGTCAC CGACGAGGCC GGACGCATCC TCATGGTTCA CAAGACCGAC
AACGACCTGT GGGCCCTGCC CGGCGGCGGC ATGGACCTCG GCGAATCCAT CACCGACGCC
GCCGTCCGCG AGACCAAGGA AGAGACCGGC ATCGATATCG AGGTCACCGG GTTGATCGGG
GTCTACACCA ACCCCCGGCA CGTCCTGGCC TACGACGACG GCGAGGTCCG CCAGCAGTTC
TCGCTCTGCT TCACCACCCG CAATCTCGGC GGAGAGCTAC GCACCTCCAG CGAGACGAAG
GAGGTCCAGT TCGTCGCACC CGAGGACCTG GACACGCTGA ACATCCACCC GTCGATGCGA
CTCAGGATCG ATCACTACCT GGAGAACCGC GCGACGCCCT ACCTTGGCTG A
 
Protein sequence
MARIDYFNDP NAPKANSVVP SVTAVVTDEA GRILMVHKTD NDLWALPGGG MDLGESITDA 
AVRETKEETG IDIEVTGLIG VYTNPRHVLA YDDGEVRQQF SLCFTTRNLG GELRTSSETK
EVQFVAPEDL DTLNIHPSMR LRIDHYLENR ATPYLG