Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5333 |
Symbol | |
ID | 5673667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6423208 |
End bp | 6423678 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641244191 |
Product | NUDIX hydrolase |
Protein accession | YP_001509597 |
Protein GI | 158317089 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.66797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0715353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGCGAA TCGACTACTT CAACGACCCG AACGCCCCCA AGGCGAACAG CGTCGTCCCC TCCGTGACCG CCGTCGTCAC CGACGAGGCC GGACGCATCC TCATGGTTCA CAAGACCGAC AACGACCTGT GGGCCCTGCC CGGCGGCGGC ATGGACCTCG GCGAATCCAT CACCGACGCC GCCGTCCGCG AGACCAAGGA AGAGACCGGC ATCGATATCG AGGTCACCGG GTTGATCGGG GTCTACACCA ACCCCCGGCA CGTCCTGGCC TACGACGACG GCGAGGTCCG CCAGCAGTTC TCGCTCTGCT TCACCACCCG CAATCTCGGC GGAGAGCTAC GCACCTCCAG CGAGACGAAG GAGGTCCAGT TCGTCGCACC CGAGGACCTG GACACGCTGA ACATCCACCC GTCGATGCGA CTCAGGATCG ATCACTACCT GGAGAACCGC GCGACGCCCT ACCTTGGCTG A
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Protein sequence | MARIDYFNDP NAPKANSVVP SVTAVVTDEA GRILMVHKTD NDLWALPGGG MDLGESITDA AVRETKEETG IDIEVTGLIG VYTNPRHVLA YDDGEVRQQF SLCFTTRNLG GELRTSSETK EVQFVAPEDL DTLNIHPSMR LRIDHYLENR ATPYLG
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