Gene Franean1_5322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5322 
Symbol 
ID5673656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6412433 
End bp6413314 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content69% 
IMG OID641244179 
Productaldo/keto reductase 
Protein accessionYP_001509586 
Protein GI158317078 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0362532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTC AGGCAGCCAG CCGCGACGTG ACCGCGGCGG CGAGCGGGAC GTTCCTGCTC 
GGAGGCGAAC TACCCGTGAA CCGGCTCGGT TTCGGCGCGA TGCGGATCAC CGGGCCGGGC
ATCTGGGGCG AACCCGCGGA CCGGGCGGAG GCCATCGCCG TACTGCGCAG GTCGGTGGAA
CTCGGCGTGA ACTTCATCGA CACGGCCGAC TCCTACGGCC CGCACGTCAG CGAGGAGTTG
ATCGCCGAGG CCCTGCACCC CTATCCAGAC GGCCTGGTGA TCGCGACGAA GGGCGGTCTC
ACGCGGCAGG GGCCGGACCA GTGGACTGCC GTGGGACGCG CCCCATACCT GCGCCAGCAG
GTCGAACTGT CGCTGCGCCG CCTCAAGCTC GAGCGCATCG ATCTCTACCA GCTCCACCGC
ATCGACCCGA GGACTCCCGT CGAGGAGTCC CTCGGCGAAC TGCGGGCGCT GCAGCAGGAA
GGCAAGATCC GCCAGATCGG GCTCTCGGAG GTCAGCGTCG CCGAGCTGGA GCACAGCCGG
TCGCTGGCGG AGATCGTCAG CGTGCAGAAC CGGTACAACC TCGCCGACCG CGCCTCCGAG
GACGTCCTCG ACTACGCGGA ACGCGAGGGT ATCGGCTTCA TCCCCTGGTT CCCCGTCGCG
ACCGGTACAC TCGCGCGACC AGGCGGAGTC CTCGACGCGA TCGCGAAGCG GCACGGCTCG
CAACCCGCGC AGCTGGCGCT GGCATGGCTG CTGCGCAGGT CACCCGTGAT GCTGCCGATC
CCGGGCACGT CGTCGACCGC CCACCTGGAG GAGAACGTCG CCGCGGCAGG AGTCAGCCTC
ACCGACTCCG AGTTCGACGA GCTGGCCAAA CTGGTCAGCT GA
 
Protein sequence
MSTQAASRDV TAAASGTFLL GGELPVNRLG FGAMRITGPG IWGEPADRAE AIAVLRRSVE 
LGVNFIDTAD SYGPHVSEEL IAEALHPYPD GLVIATKGGL TRQGPDQWTA VGRAPYLRQQ
VELSLRRLKL ERIDLYQLHR IDPRTPVEES LGELRALQQE GKIRQIGLSE VSVAELEHSR
SLAEIVSVQN RYNLADRASE DVLDYAEREG IGFIPWFPVA TGTLARPGGV LDAIAKRHGS
QPAQLALAWL LRRSPVMLPI PGTSSTAHLE ENVAAAGVSL TDSEFDELAK LVS